Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

{2023.06}[foss/2023a,zen4] OrthoFinder v2.5.5 for zen4 #727

Merged
merged 1 commit into from
Sep 20, 2024

Conversation

laraPPr
Copy link
Collaborator

@laraPPr laraPPr commented Sep 20, 2024

No description provided.

@laraPPr laraPPr added 2023.06-software.eessi.io 2023.06 version of software.eessi.io zen4 labels Sep 20, 2024
Copy link

eessi-bot bot commented Sep 20, 2024

Instance eessi-bot-mc-aws is configured to build for:

  • architectures: x86_64/generic, x86_64/intel/haswell, x86_64/intel/skylake_avx512, x86_64/amd/zen2, x86_64/amd/zen3, aarch64/generic, aarch64/neoverse_n1, aarch64/neoverse_v1
  • repositories: eessi.io-2023.06-compat, eessi-hpc.org-2023.06-software, eessi-hpc.org-2023.06-compat, eessi.io-2023.06-software

Instance boegel-bot-deucalion is configured to build for:

  • architectures: aarch64/a64fx
  • repositories: eessi.io-2023.06-software

Copy link

eessi-bot bot commented Sep 20, 2024

Instance eessi-bot-mc-azure is configured to build for:

  • architectures: x86_64/amd/zen4
  • repositories: eessi-hpc.org-2023.06-software, eessi-hpc.org-2023.06-compat, eessi.io-2023.06-software, eessi.io-2023.06-compat

@laraPPr
Copy link
Collaborator Author

laraPPr commented Sep 20, 2024

bot: build repo:eessi.io-2023.06-software arch:zen4

Copy link

eessi-bot bot commented Sep 20, 2024

Updates by the bot instance eessi-bot-mc-aws (click for details)
  • received bot command build repo:eessi.io-2023.06-software arch:zen4 from laraPPr

    • expanded format: build repository:eessi.io-2023.06-software architecture:zen4
  • handling command build repository:eessi.io-2023.06-software architecture:zen4 resulted in:

    • no jobs were submitted

Updates by the bot instance boegel-bot-deucalion (click for details)
  • account laraPPr has NO permission to send commands to the bot

Copy link

eessi-bot bot commented Sep 20, 2024

Updates by the bot instance eessi-bot-mc-azure (click for details)
  • received bot command build repo:eessi.io-2023.06-software arch:zen4 from laraPPr

    • expanded format: build repository:eessi.io-2023.06-software architecture:zen4
  • handling command build repository:eessi.io-2023.06-software architecture:zen4 resulted in:

Copy link

eessi-bot bot commented Sep 20, 2024

New job on instance eessi-bot-mc-azure for CPU micro-architecture x86_64-amd-zen4 for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.09/pr_727/868

date job status comment
Sep 20 06:33:57 UTC 2024 submitted job id 868 awaits release by job manager
Sep 20 06:34:48 UTC 2024 released job awaits launch by Slurm scheduler
Sep 20 06:38:51 UTC 2024 running job 868 is running
Sep 20 07:26:54 UTC 2024 finished
😁 SUCCESS (click triangle for details)
Details
✅ job output file slurm-868.out
✅ no message matching ERROR:
✅ no message matching FAILED:
✅ no message matching required modules missing:
✅ found message(s) matching No missing installations
✅ found message matching .tar.gz created!
Artefacts
eessi-2023.06-software-linux-x86_64-amd-zen4-1726816414.tar.gzsize: 566 MiB (594078933 bytes)
entries: 6080
modules under 2023.06/software/linux/x86_64/amd/zen4/modules/all
BLAST+/2.14.1-gompi-2023a.lua
LMDB/0.9.31-GCCcore-12.3.0.lua
MCL/22.282-GCCcore-12.3.0.lua
MMseqs2/14-7e284-gompi-2023a.lua
OrthoFinder/2.5.5-foss-2023a.lua
cimfomfa/22.273-GCCcore-12.3.0.lua
cpio/2.15-GCCcore-12.3.0.lua
software under 2023.06/software/linux/x86_64/amd/zen4/software
BLAST+/2.14.1-gompi-2023a
LMDB/0.9.31-GCCcore-12.3.0
MCL/22.282-GCCcore-12.3.0
MMseqs2/14-7e284-gompi-2023a
OrthoFinder/2.5.5-foss-2023a
cimfomfa/22.273-GCCcore-12.3.0
cpio/2.15-GCCcore-12.3.0
other under 2023.06/software/linux/x86_64/amd/zen4
no other files in tarball
Sep 20 07:26:54 UTC 2024 test result
😁 SUCCESS (click triangle for details)
ReFrame Summary
[ PASSED ] Ran 5/5 test case(s) from 5 check(s) (0 failure(s), 0 skipped, 0 aborted)
Details
✅ job output file slurm-868.out
✅ no message matching ERROR:
✅ no message matching [\s*FAILED\s*].*Ran .* test case
Sep 20 09:20:14 UTC 2024 uploaded transfer of eessi-2023.06-software-linux-x86_64-amd-zen4-1726816414.tar.gz to S3 bucket succeeded

@laraPPr laraPPr added the ready-to-deploy Mark a PR as ready to deploy label Sep 20, 2024
@bedroge bedroge added bot:deploy Ask bot to deploy missing software installations to EESSI and removed ready-to-deploy Mark a PR as ready to deploy labels Sep 20, 2024

Label bot:deploy has been set by user bedroge, but this person does not have permission to trigger deployments

@bedroge bedroge merged commit ad0e14c into EESSI:2023.06-software.eessi.io Sep 20, 2024
35 checks passed
Copy link

eessi-bot bot commented Sep 20, 2024

PR merged! Moved [] to /project/def-users/SHARED/trash_bin/EESSI/software-layer/2024.09.20

Copy link

eessi-bot bot commented Sep 20, 2024

PR merged! Moved ['/project/def-users/SHARED/jobs/2024.09/pr_727/868'] to /project/def-users/SHARED/trash_bin/EESSI/software-layer/2024.09.20

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
2023.06-software.eessi.io 2023.06 version of software.eessi.io bot:deploy Ask bot to deploy missing software installations to EESSI zen4
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants