Bump the python-dependencies group with 4 updates (#2101)

* Bump the python-dependencies group with 4 updates

Bumps the python-dependencies group with 4 updates: [pydantic-settings](https://github.com/pydantic/pydantic-settings), [pymongo](https://github.com/mongodb/mongo-python-driver), [jarvis-tools](https://github.com/usnistgov/jarvis) and [mike](https://github.com/jimporter/mike).


Updates `pydantic-settings` from 2.3.3 to 2.3.4
- [Release notes](https://github.com/pydantic/pydantic-settings/releases)
- [Commits](pydantic/pydantic-settings@v2.3.3...v2.3.4)

Updates `pymongo` from 4.7.3 to 4.8.0
- [Release notes](https://github.com/mongodb/mongo-python-driver/releases)
- [Changelog](https://github.com/mongodb/mongo-python-driver/blob/master/doc/changelog.rst)
- [Commits](mongodb/mongo-python-driver@4.7.3...4.8.0)

Updates `jarvis-tools` from 2024.4.10 to 2024.5.10
- [Release notes](https://github.com/usnistgov/jarvis/releases)
- [Commits](usnistgov/jarvis@v2024.4.10...v2024.5.10)

Updates `mike` from 2.1.1 to 2.1.2
- [Release notes](https://github.com/jimporter/mike/releases)
- [Changelog](https://github.com/jimporter/mike/blob/master/CHANGES.md)
- [Commits](jimporter/mike@v2.1.1...v2.1.2)

---
updated-dependencies:
- dependency-name: pydantic-settings
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: pymongo
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python-dependencies
- dependency-name: jarvis-tools
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python-dependencies
- dependency-name: mike
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
...

Signed-off-by: dependabot[bot] <support@github.com>

* Print out warnings

---------

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: Casper Welzel Andersen <casper.w.andersen@sintef.no>

requirements-client.txt

@@ -1,5 +1,5 @@
 aiida-core==2.5.2
 ase==3.23.0
-jarvis-tools==2024.4.10
+jarvis-tools==2024.5.10
 numpy>=1.20
 pymatgen==2024.5.1

requirements-docs.txt

@@ -1,4 +1,4 @@
-mike==2.1.1
+mike==2.1.2
 mkdocs==1.6.0
 mkdocs-awesome-pages-plugin==2.9.2
 mkdocs-material==9.5.27

requirements-server.txt

@@ -2,4 +2,4 @@ elasticsearch==7.17.9
 elasticsearch-dsl==7.4.1
 fastapi==0.111.0
 mongomock==4.1.2
-pymongo==4.7.3
+pymongo==4.8.0

requirements.txt

@@ -1,6 +1,6 @@
 lark==1.1.9
 pydantic[email]==2.7.4
-pydantic_settings==2.3.3
+pydantic_settings==2.3.4
 pyyaml==6.0.1
 requests==2.32.3
 uvicorn==0.30.1

tests/server/middleware/test_warnings.py

@@ -68,7 +68,7 @@ def test_showwarning_debug(both_clients, recwarn):
         assert "meta" in warning
         for meta_field in ("filename", "lineno", "line"):
             assert meta_field in warning["meta"]
-        assert len(recwarn.list) == 1
+        assert len(recwarn.list) == 1, "\n\n".join(str(_) for _ in recwarn.list)
         assert recwarn.pop(OptimadeWarning)
     finally:
         CONFIG.debug = org_debug