remove support for text (ASCII) tskit I/O

MesserLab · Sep 20, 2024 · bd1d9e0 · bd1d9e0
1 parent b33a104
commit bd1d9e0
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Showing 4 changed files with 18 additions and 624 deletions.
diff --git a/core/slim_test_other.cpp b/core/slim_test_other.cpp
@@ -2098,15 +2098,11 @@ void _RunTreeSeqTests(const std::string &temp_path)
 	// treeSeqOutput()
 	if (Eidos_TemporaryDirectoryExists())
 	{
-		SLiMAssertScriptStop("initialize() { initializeTreeSeq(); } " + gen1_setup_p1 + "100 early() { sim.treeSeqOutput('" + temp_path + "/SLiM_treeSeq_1.trees', simplify=F, _binary=F); stop(); }", __LINE__);
-		SLiMAssertScriptStop("initialize() { initializeTreeSeq(); } " + gen1_setup_p1 + "100 early() { sim.treeSeqOutput('" + temp_path + "/SLiM_treeSeq_2.trees', simplify=T, _binary=F); stop(); }", __LINE__);
-		SLiMAssertScriptStop("initialize() { initializeTreeSeq(); } " + gen1_setup_p1 + "100 early() { sim.treeSeqOutput('" + temp_path + "/SLiM_treeSeq_3.trees', simplify=F, _binary=T); stop(); }", __LINE__);
-		SLiMAssertScriptStop("initialize() { initializeTreeSeq(); } " + gen1_setup_p1 + "100 early() { sim.treeSeqOutput('" + temp_path + "/SLiM_treeSeq_4.trees', simplify=T, _binary=T); stop(); }", __LINE__);
-
-		SLiMAssertScriptStop("initialize() { initializeTreeSeq(); } " + gen1_setup_p1 + "100 early() { sim.treeSeqOutput('" + temp_path + "/SLiM_treeSeq_1.trees', simplify=F, includeModel=F, _binary=F); stop(); }", __LINE__);
-		SLiMAssertScriptStop("initialize() { initializeTreeSeq(); } " + gen1_setup_p1 + "100 early() { sim.treeSeqOutput('" + temp_path + "/SLiM_treeSeq_2.trees', simplify=T, includeModel=F, _binary=F); stop(); }", __LINE__);
-		SLiMAssertScriptStop("initialize() { initializeTreeSeq(); } " + gen1_setup_p1 + "100 early() { sim.treeSeqOutput('" + temp_path + "/SLiM_treeSeq_3.trees', simplify=F, includeModel=F, _binary=T); stop(); }", __LINE__);
-		SLiMAssertScriptStop("initialize() { initializeTreeSeq(); } " + gen1_setup_p1 + "100 early() { sim.treeSeqOutput('" + temp_path + "/SLiM_treeSeq_4.trees', simplify=T, includeModel=F, _binary=T); stop(); }", __LINE__);
+		SLiMAssertScriptStop("initialize() { initializeTreeSeq(); } " + gen1_setup_p1 + "100 early() { sim.treeSeqOutput('" + temp_path + "/SLiM_treeSeq_1.trees', simplify=F); stop(); }", __LINE__);
+		SLiMAssertScriptStop("initialize() { initializeTreeSeq(); } " + gen1_setup_p1 + "100 early() { sim.treeSeqOutput('" + temp_path + "/SLiM_treeSeq_2.trees', simplify=T); stop(); }", __LINE__);
+
+		SLiMAssertScriptStop("initialize() { initializeTreeSeq(); } " + gen1_setup_p1 + "100 early() { sim.treeSeqOutput('" + temp_path + "/SLiM_treeSeq_1.trees', simplify=F, includeModel=F); stop(); }", __LINE__);
+		SLiMAssertScriptStop("initialize() { initializeTreeSeq(); } " + gen1_setup_p1 + "100 early() { sim.treeSeqOutput('" + temp_path + "/SLiM_treeSeq_2.trees', simplify=T, includeModel=F); stop(); }", __LINE__);
 	}
 }