Cannot find function Oncogenic Pathways

[londonlondon20]

Describe the issue
Hello! I am using maftools version 2.21.1 and am not able to use the function OncogenicPathways. I saw some documentation online that this function may only exist under v2.6.05, but I don't know how to install that version. Really appreciate your help!

Command
Please post your commands and the output (errors or any unexpected output)

packageVersion("maftools") [1] ‘2.21.1’ > library(maftools) > C.pathway=OncogenicPathways(maf=C.maf) Error in OncogenicPathways(maf = CTE.maf) : could not find function "OncogenicPathways"

Session info
Run sessionInfo() and post the output below

R version 4.4.1 (2024-06-14 ucrt) Running under: Windows 11 x64 Matrix products: default attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] maftools_2.21.1 loaded via a namespace (and not attached): [1] desc_1.4.3 RColorBrewer_1.1-3 R6_2.5.1 Matrix_1.7-0 lattice_0.22-6 splines_4.4.1 [7] remotes_2.5.0 ps_1.8.0 cli_3.6.3 processx_3.8.4 callr_3.7.6 grid_4.4.1 [13] data.table_1.16.0 compiler_4.4.1 rstudioapi_0.16.0 tools_4.4.1 pkgbuild_1.4.4 curl_5.2.3 [19] survival_3.7-0 DNAcopy_1.78.0 BiocManager_1.30.25

[PoisonAlien]

Hi,

This function has been replaced by the more generic pathways(). Please switch to it.
?pathways() for more info.