diff --git a/run_pipeline.sh b/run_pipeline.sh index ea7c910..910b668 100755 --- a/run_pipeline.sh +++ b/run_pipeline.sh @@ -121,6 +121,10 @@ fi set +euo pipefail +echo "--start env--" +env +echo "--end--" + SEQ_KEYS= SEQ_ENV=`env | grep irods_input_sequencing` for SEQ_AVU in ${SEQ_ENV}