From a75e9bc4704795c2a5bc1568d3fb9864ff7c5b76 Mon Sep 17 00:00:00 2001 From: Astrid Deschenes Date: Wed, 3 Apr 2024 17:12:53 -0400 Subject: [PATCH] Update doc for extractInformationWhenNoIntersection() function --- R/methodsInternal.R | 10 +++++----- man/extractInformationWhenNoIntersection.Rd | 10 +++++----- 2 files changed, 10 insertions(+), 10 deletions(-) diff --git a/R/methodsInternal.R b/R/methodsInternal.R index b78a6ce..e4d7aaa 100644 --- a/R/methodsInternal.R +++ b/R/methodsInternal.R @@ -415,11 +415,11 @@ extractInformationWhenIntersection <- function(gostResults) { #' #' @return \code{list} containing 2 entries: #' \itemize{ -#' \item{"geneNodes"}{a \code{data.frame} containing the information about -#' the nodes present in the network. The nodes are genes.} -#' \item{"termNodes"}{a \code{data.frame} containing the information about -#' the nodes present in the network. The nodes are terms.} -#' \item{"edges"}{a \code{data.frame} containing the information about +#' \item{\code{geneNodes}}{ a \code{data.frame} containing the information +#' about the nodes present in the network. The nodes are genes.} +#' \item{\code{termNodes}}{ a \code{data.frame} containing the information +#' about the nodes present in the network. The nodes are terms.} +#' \item{\code{edges}}{ a \code{data.frame} containing the information about #' the edges present in the network. The edges connect one gene to one term.} #' } #' diff --git a/man/extractInformationWhenNoIntersection.Rd b/man/extractInformationWhenNoIntersection.Rd index 12a3ef6..2bc21b0 100644 --- a/man/extractInformationWhenNoIntersection.Rd +++ b/man/extractInformationWhenNoIntersection.Rd @@ -19,11 +19,11 @@ the results and meta-data from an enrichment analysis.} \value{ \code{list} containing 2 entries: \itemize{ -\item{"geneNodes"}{a \code{data.frame} containing the information about -the nodes present in the network. The nodes are genes.} -\item{"termNodes"}{a \code{data.frame} containing the information about -the nodes present in the network. The nodes are terms.} -\item{"edges"}{a \code{data.frame} containing the information about +\item{\code{geneNodes}}{ a \code{data.frame} containing the information +about the nodes present in the network. The nodes are genes.} +\item{\code{termNodes}}{ a \code{data.frame} containing the information +about the nodes present in the network. The nodes are terms.} +\item{\code{edges}}{ a \code{data.frame} containing the information about the edges present in the network. The edges connect one gene to one term.} } }