diff --git a/erpnext/stock/doctype/delivery_note/delivery_note.py b/erpnext/stock/doctype/delivery_note/delivery_note.py
index 66dd33a40005..f240136e9c28 100644
--- a/erpnext/stock/doctype/delivery_note/delivery_note.py
+++ b/erpnext/stock/doctype/delivery_note/delivery_note.py
@@ -615,7 +615,7 @@ def get_product_bundle_list(self):
 		items_list = [item.item_code for item in self.items]
 		return frappe.db.get_all(
 			"Product Bundle",
-			filters={"new_item_code": ["in", items_list]},
+			filters={"new_item_code": ["in", items_list], "disabled": 0},
 			pluck="name",
 		)
 
@@ -938,7 +938,7 @@ def update_item(obj, target, source_parent):
 				},
 				"postprocess": update_item,
 				"condition": lambda item: (
-					not frappe.db.exists("Product Bundle", {"new_item_code": item.item_code})
+					not frappe.db.exists("Product Bundle", {"new_item_code": item.item_code, "disabled": 0})
 					and flt(item.packed_qty) < flt(item.qty)
 				),
 			},
diff --git a/erpnext/stock/doctype/item/item.py b/erpnext/stock/doctype/item/item.py
index d8935fe20308..cb34497f2805 100644
--- a/erpnext/stock/doctype/item/item.py
+++ b/erpnext/stock/doctype/item/item.py
@@ -512,8 +512,12 @@ def validate_properties_before_merge(self, new_name):
 
 	def validate_duplicate_product_bundles_before_merge(self, old_name, new_name):
 		"Block merge if both old and new items have product bundles."
-		old_bundle = frappe.get_value("Product Bundle", filters={"new_item_code": old_name})
-		new_bundle = frappe.get_value("Product Bundle", filters={"new_item_code": new_name})
+		old_bundle = frappe.get_value(
+			"Product Bundle", filters={"new_item_code": old_name, "disabled": 0}
+		)
+		new_bundle = frappe.get_value(
+			"Product Bundle", filters={"new_item_code": new_name, "disabled": 0}
+		)
 
 		if old_bundle and new_bundle:
 			bundle_link = get_link_to_form("Product Bundle", old_bundle)
diff --git a/erpnext/stock/doctype/packed_item/packed_item.py b/erpnext/stock/doctype/packed_item/packed_item.py
index 8b6f7158e04a..35701c90deb8 100644
--- a/erpnext/stock/doctype/packed_item/packed_item.py
+++ b/erpnext/stock/doctype/packed_item/packed_item.py
@@ -55,7 +55,7 @@ def make_packing_list(doc):
 
 
 def is_product_bundle(item_code: str) -> bool:
-	return bool(frappe.db.exists("Product Bundle", {"new_item_code": item_code}))
+	return bool(frappe.db.exists("Product Bundle", {"new_item_code": item_code, "disabled": 0}))
 
 
 def get_indexed_packed_items_table(doc):
diff --git a/erpnext/stock/doctype/pick_list/pick_list.py b/erpnext/stock/doctype/pick_list/pick_list.py
index ed2020957749..644df3d29a3b 100644
--- a/erpnext/stock/doctype/pick_list/pick_list.py
+++ b/erpnext/stock/doctype/pick_list/pick_list.py
@@ -368,7 +368,9 @@ def aggregate_item_qty(self):
 				frappe.throw("Row #{0}: Item Code is Mandatory".format(item.idx))
 			if not cint(
 				frappe.get_cached_value("Item", item.item_code, "is_stock_item")
-			) and not frappe.db.exists("Product Bundle", {"new_item_code": item.item_code}):
+			) and not frappe.db.exists(
+				"Product Bundle", {"new_item_code": item.item_code, "disabled": 0}
+			):
 				continue
 			item_code = item.item_code
 			reference = item.sales_order_item or item.material_request_item
@@ -507,7 +509,9 @@ def _get_product_bundle_qty_map(self, bundles: List[str]) -> Dict[str, Dict[str,
 		# bundle_item_code: Dict[component, qty]
 		product_bundle_qty_map = {}
 		for bundle_item_code in bundles:
-			bundle = frappe.get_last_doc("Product Bundle", {"new_item_code": bundle_item_code})
+			bundle = frappe.get_last_doc(
+				"Product Bundle", {"new_item_code": bundle_item_code, "disabled": 0}
+			)
 			product_bundle_qty_map[bundle_item_code] = {item.item_code: item.qty for item in bundle.items}
 		return product_bundle_qty_map