From f7dd63e7178ac1a7587649b81a8577b399d26ae2 Mon Sep 17 00:00:00 2001 From: Colleen Xu Date: Fri, 4 Oct 2024 11:31:35 -0700 Subject: [PATCH] feat: use individual automats rather than robokop --- config/api_list.yaml | 46 +++++++++++++++++++++++++++++++++++++++++--- 1 file changed, 43 insertions(+), 3 deletions(-) diff --git a/config/api_list.yaml b/config/api_list.yaml index b301ce4..dbb25d7 100644 --- a/config/api_list.yaml +++ b/config/api_list.yaml @@ -102,9 +102,49 @@ include: name: Text Mining Targeted Association API # TRAPI (Translator standard) APIs: Automat # not accessible by team or api-specific endpoints - # using robokop to access all automat resources at once - - id: 4f9c8853b721ef1f14ecee6d92fc19b5 - name: Automat-robokop(Trapi v1.5.0) + # using all individual automat resources, not using robokop + - id: a9d6ee341d8ea4c7d3ae9ed0941cb274 + name: Automat-binding-db(Trapi v1.5.0) + - id: 7ab0209ea8590341d8e5d0166cac3d2f + name: Automat-cam-kp(Trapi v1.5.0) + - id: f82c01b15c46e024212c1a3271aaef0b + name: Automat-ctd(Trapi v1.5.0) + - id: 673b9fc76973dfa5fe3ed151fdbfc807 + name: Automat-drug-central(Trapi v1.5.0) + - id: b4c868db33b95b4890faeeefd5800552 + name: Automat-genome-alliance(Trapi v1.5.0) + - id: eef72049e4e01c020b7799f711e0e65b + name: Automat-gtex(Trapi v1.5.0) + - id: 759df287a21c30cd514df323be02a84b + name: Automat-gtopdb(Trapi v1.5.0) + - id: 349fed5531c094c33f10c071efe9d0de + name: Automat-gwas-catalog(Trapi v1.5.0) + - id: a5fe24f987331b58191e67598118f369 + name: Automat-hetionet(Trapi v1.5.0) + - id: 8671309d2b94e413a4c1f9a9f82e4660 + name: Automat-hgnc(Trapi v1.5.0) + - id: 0a1c0f46f4950b82b1aa7dad27aad10a + name: Automat-hmdb(Trapi v1.5.0) + - id: cb7a43d444cb3dcbe8e3c78d314334cf + name: Automat-human-goa(Trapi v1.5.0) + - id: c64d583402f21cc85810d33befe49c86 + name: Automat-icees-kg(Trapi v1.5.0) + - id: b4023595664163e0aec5e825da150e16 + name: Automat-intact(Trapi v1.5.0) + - id: 6b88f83127513bd350e6962218ea84f4 + name: Automat-monarchinitiative(Trapi v1.5.0) + - id: 3f78d3fb8a7a577fbc7cc0a913ac3fc5 + name: Automat-panther(Trapi v1.5.0) + - id: 1f057c53d42694686369f0e542f965c6 + name: Automat-pharos(Trapi v1.5.0) + - id: 61b41c5d9b90eb8ad16e037f9a87d593 + name: Automat-reactome(Trapi v1.5.0) + - id: 7984a621a28c109c5c09f65fed0e7ea7 + name: Automat-string-db(Trapi v1.5.0) + - id: dde0552a37fc136526216148ff7594a0 + name: Automat-ubergraph(Trapi v1.5.0) + - id: 2aca41fc6c3dc426ec6583d42603be02 + name: Automat-viral-proteome(Trapi v1.5.0) # TRAPI (Translator standard) APIs: COHD # not accessible by team or api-specific endpoints # notes on COHD: