moseq2 linux install appears to work but packages are not installed

[burkheadjl]

I could not find anything about this in the open issues: as I go through the Anaconda install, everything seems to work, but upon verifying that packages are installed, the error is that the files to not exist. I checked the appropriate directory under the anaconda environment and confirmed that the expected packages (extract, pca, etc.) are not installed

Expected Behavior

when checking for example: moseq2-extract --version, the result should be

moseq2-exract, version 1.1.2

Current Behavior

(moseq2-app) copper2@anc-5rhs1v3:~/moseq2-app$ moseq2-extract --version
Traceback (most recent call last):
File "/home/copper2/miniconda3/envs/moseq2-app/bin/moseq2-extract", line 5, in
from moseq2_extract.cli import cli
File "/home/copper2/miniconda3/envs/moseq2-app/lib/python3.7/site-packages/moseq2_extract/cli.py", line 10, in
from moseq2_extract.util import command_with_config, read_yaml, recursive_find_unextracted_dirs
File "/home/copper2/miniconda3/envs/moseq2-app/lib/python3.7/site-packages/moseq2_extract/util.py", line 6, in
import cv2
File "/home/copper2/miniconda3/envs/moseq2-app/lib/python3.7/site-packages/cv2/init.py", line 3, in
from .cv2 import *
ImportError: libSM.so.6: cannot open shared object file: No such file or directory

Possible Solution

Steps to Reproduce (for bugs)

following anaconda install tutorial EXACTLY, then attempt to verify version
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Screenshots

Context

Your Environment

• Version/GitHub branch used:
• Device: [e.g. iPhone6]
• OS: [e.g. iOS8.1]
• Link to your project:

[austin2118ace]

Ran into the same issue today on WSL. The following fixed the error:

sudo apt update
sudo apt install -y libsm6 libxext6 libxrender-dev