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Windows line endings can cause issues in BED/GTF files #506

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dpryan79 opened this issue Apr 8, 2017 · 2 comments
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Windows line endings can cause issues in BED/GTF files #506

dpryan79 opened this issue Apr 8, 2017 · 2 comments
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dpryan79 commented Apr 8, 2017

Thankfully, few people prepare BED files under Windows, but if they did that could cause problems due to deeptoolsintervals not opening files with "universal line endings". This is a trivial fix, so this issue report will just serve as a reminder for me to implement and test it.
@dpryan79 dpryan79 self-assigned this Apr 8, 2017
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dpryan79 commented Apr 8, 2017

Amusingly, this is only an issue in python2.

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This is now implemented in the develop branch and will get included either in 2.5.1 or 2.6 (mostly depending on whether we feel like calling this a bug or not).

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