meet-011_2024-07-31.md

Meeting agenda, notes and actions for 2024-07-31 at 12 noon ET

Hackpad link

Organizer : Daniel Wheeler

Attendees : - Daniel Wheeler (he/him)

• David Montiel (he/him)
• Stephen DeWitt (he/him)
• Kasra Momeni (he/him)
• Trevor Keller (they/them), NIST
• Austyn Nguyen

Links

• Google Meet
• WG GitHub repository
• Google Docs
• Previous meeting notes
• Proposal document
• Resource links
• Overleaf publication

Agenda

1. Any questions or items to raise for discussion (please add)
2. Reminders
   • Next office hours:
     • 2024-08-02, Friday, 11AM ET
     • 2024-08-16, Friday, 11AM ET
   • Next WG meet
     • 2024-08-28, Wednesday, 12-noon ET
3. Current state of the RO-Crate example (work with Austyn Nguyen)
   • We are a lot more comfortable with RO-Crate and the possibilities
   • New RO-Crate example
   • HTML view of RO-Crate
   • Graph view
   • The benchmark spec is included alongside an environment file, inputs and outputs as well.
   • CreateAction is the top level entity for the actual workflow
   • See this for more descriptions of how it works
   • Bioschemas also used for ComputationalTool
4. We can push any new schema to be a subset of Workflow run ro-crate here
   • However, this is not always necessary
   • DefinedTerm gives a lot of possibilities
   • I think we need to think about adding a specification or problemDefinition field to the top-level of the exisisting RO-Crate terms. Possibly augement a Dataset to have a governingEquations field.
   • The existing RO-Crate extra terms
     • Notice that these have a lot of possibilities to add containers
     • A lot of the existing augmentations for Workflow run are for CreateAction, which I've demonstrated works well for our needs.
5. Gave a short presentation to the Workflow Run RO-Crate group about our use case and recieved some usefule feedback.
6. Galaxy's tutorial: RO-Crate - Introduction
7. Ideas

Notes / Action Items