Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Include relations of NCBITaxon:species #10

Open
HLWeil opened this issue Feb 22, 2023 · 0 comments
Open

Include relations of NCBITaxon:species #10

HLWeil opened this issue Feb 22, 2023 · 0 comments

Comments

@HLWeil
Copy link
Member

HLWeil commented Feb 22, 2023

Issue:

The term species of the NCBITaxon ontology can be found using the SwateAPI:
image

Unfortunately, I can't find any of the related terms from the NCBITaxon ontology:
image

Expected Behaviour

In the ontology, the term Arabidopsis thaliana is linked with the class species via the has_rank field:
https://ontobee.org/ontology/NCBITaxon?iri=http://purl.obolibrary.org/obo/NCBITaxon_3702

I would expect for this relation to create a searchable linking between these terms. This would also allow to use the other taxonomic ranks (e.g. genus, family) as headers to further specify the target organism at hand.

I talked with @Freymaurer and he told me this might be solvable in Swobup.

@kdumschott @Brilator @andreaschrader

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant