OpenScan is a Micro-Manager-based laser scanning microscopy (LSM) platform that features composable scanning and detection modules for different LSM hardware configurations and multiple imaging modalities. https://eliceirilab.org/openscan/
This repository currently only provides an overview and pointers to the repositories that actually contain code:
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OpenScanLib is the core library, written in C, providing hardware abstraction and coordination between the device functions of clock, scanner, and detector. It can be used as a stand-alone C library for LSM (it does not depend on Micro-Manager).
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openscan-mm-adapter is a Micro-Manager device adapter that interfaces with OpenScanLib.
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OpenScan-OpenScanNIDAQ is a device module for OpenScanLib that uses a National Instruments X-Series DAQ for scan waveform generation and analog image acquisition.
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OpenScan-OpenScanNIFPGA is a device module for OpenScanLib that uses a National Instruments FlexRIO FPGA module for scan waveform generation (digital) and photon-counting image acquisition.
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OpenScan-BH_SPC is a device module for OpenScanLib that acquires TCSPC data from a Becker & Hickl SPC module. Although Micro-Manager and OpenScanLib do not natively support FLIM data, this module can save the photon timestamp and FLIM histogram image data to files.
Please see the LICENSE.txt file in each repository. Generally we use the BSD 2-Clause license for software code where possible.
Our Code of Conduct applies to all projects under github.com/openscan-lsm.