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Dataset 8. mbltree.calibrated.txt
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Dataset 8. mbltree.calibrated.txt
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#NEXUS
[R-package APE, Mon Aug 16 17:25:02 2021]
BEGIN TAXA;
DIMENSIONS NTAX = 143;
TAXLABELS
Proganochelys_quenstedii
Australochelys_africanus
Kayentachelys_aprix
Eileanchelys_waldmanni
Naomichelys_speciosa
Uluops_uluops
Eubaena_cephalica
Arundelemys_dardeni
Kallokibotion_bajazidi
Meiolania_platyceps
Annemys_sp
Xinjiangchelys_radiplicatoides
Ordosemys_sp
Sandownia_harrisi
Solnhofia_parsonsi
Plesiochelys_etalloni
Plesiochelys_bigleri
Plesiochelys_planiceps
Portlandemys_mcdowelli
Jurassichelon_oleronensis
Rhinoclemmys_pulcherrima
Rhinoclemmys_melanosterna
Mauremys_leprosa
Cuora_flavomarginata
Cuora_amboinensis
Cuora_mouhotii
Cyclemys_dentata
Heosemys_annandalii
Notochelys_platynota
Sacalia_quadriocellata
Malayemys_subtrijuga
Orlitia_borneensis
Geoclemys_hamiltonii
Pangshura_tecta
Batagur_baska
Morenia_ocellata
Siebenrockiella_crassicollis
Geoemyda_spengleri
Indotestudo_forstenii
Indotestudo_elongata
Malacochersus_tornieri
Testudo_marginata
Testudo_horsfieldii
Kinixys_erosa
Chelonoidis_sp
Psammobates_tentorius
Homopus_areolatus
Aldabrachelys_gigantea
Stylemys_nebrascensis
Gopherus_flavomarginatus
Gopherus_agassizii
Manouria_impressa
Platysternon_megacephalum
Glyptemys_insculpta
Glyptemys_muhlenbergii
Emys_orbicularis
Emydoidea_blandingii
Terrapene_ornata
Terrapene_coahuila
Terrapene_carolina
Clemmys_guttata
Deirochelys_reticularia
Trachemys_scripta
Graptemys_geographica
Graptemys_pseudogeographica
Malaclemys_terrapin
Chrysemys_picta
Pseudemys_floridiana
Pseudemys_concinna
Rhinochelys_pulchriceps
Desmatochelys_lowii
Bouliachelys_suteri
Nichollsemys_baieri
Dermochelys_coriacea
Allopleuron_hofmanni
Argillochelys_antiqua
Puppigerus_camperi
Eochelone_brabantica
Caretta_caretta
Lepidochelys_olivacea
Lepidochelys_kempii
Eretmochelys_imbricata
Chelonia_mydas
Natator_depressus
Chelydropsis_murchisoni
Macrochelys_temminckii
Chelydra_serpentina
Dermatemys_mawii
Staurotypus_salvinii
Claudius_angustatus
Sternotherus_minor
Sternotherus_odoratus
Kinosternon_subrubrum
Kinosternon_baurii
Kinosternon_scorpioides
Kinosternon_hirtipes
Adocus_lineolatus
Basilemys_gaffneyi
Carettochelys_insculpta
Allaeochelys_libyca
Petrochelys_kyrgyzensis
Trionyx_triunguis
Chitra_chitra
Axestemys_infernalis
Apalone_mutica
Apalone_spinifera
Amyda_cartilaginea
Pelodiscus_sinensis
Cycloderma_frenatum
Cyclanorbis_senegalensis
Lissemys_punctata
Hydromedusa_tectifera
Phrynops_hilarii
Phrynops_geoffroanus
Platemys_platycephala
Chelus_fimbriatus
Chelodina_oblonga
Emydura_subglobosa
Elseya_dentata
Pelomedusa_subrufa
Pelusios_niger
Sahonachelys_mailakavava
Galianemys_emringeri
Galianemys_whitei
Araiochelys_hirayamai
Bothremys_maghrebiana
Bothremys_cooki
Labrostochelys_galkini
Taphrosphys_ippolitoi
Phosphatochelys_tedfordi
Ummulisani_rutgersensis
Hamadachelys_escuilliei
Yuraramirim_montealtensis
Lapparentemys_vilavilensis
Podocnemis_expansa
Podocnemis_unifilis
Podocnemis_erythrocephala
Peltocephalus_dumerilianus
Latentemys_plowdeni
Shweboemys_pilgrimi
Stereogenys_cromeri
Araripemys_barretoi
Dirqadim_schaefferi
;
END;
BEGIN TREES;
TRANSLATE
1 Proganochelys_quenstedii,
2 Australochelys_africanus,
3 Kayentachelys_aprix,
4 Eileanchelys_waldmanni,
5 Naomichelys_speciosa,
6 Uluops_uluops,
7 Eubaena_cephalica,
8 Arundelemys_dardeni,
9 Kallokibotion_bajazidi,
10 Meiolania_platyceps,
11 Annemys_sp,
12 Xinjiangchelys_radiplicatoides,
13 Ordosemys_sp,
14 Sandownia_harrisi,
15 Solnhofia_parsonsi,
16 Plesiochelys_etalloni,
17 Plesiochelys_bigleri,
18 Plesiochelys_planiceps,
19 Portlandemys_mcdowelli,
20 Jurassichelon_oleronensis,
21 Rhinoclemmys_pulcherrima,
22 Rhinoclemmys_melanosterna,
23 Mauremys_leprosa,
24 Cuora_flavomarginata,
25 Cuora_amboinensis,
26 Cuora_mouhotii,
27 Cyclemys_dentata,
28 Heosemys_annandalii,
29 Notochelys_platynota,
30 Sacalia_quadriocellata,
31 Malayemys_subtrijuga,
32 Orlitia_borneensis,
33 Geoclemys_hamiltonii,
34 Pangshura_tecta,
35 Batagur_baska,
36 Morenia_ocellata,
37 Siebenrockiella_crassicollis,
38 Geoemyda_spengleri,
39 Indotestudo_forstenii,
40 Indotestudo_elongata,
41 Malacochersus_tornieri,
42 Testudo_marginata,
43 Testudo_horsfieldii,
44 Kinixys_erosa,
45 Chelonoidis_sp,
46 Psammobates_tentorius,
47 Homopus_areolatus,
48 Aldabrachelys_gigantea,
49 Stylemys_nebrascensis,
50 Gopherus_flavomarginatus,
51 Gopherus_agassizii,
52 Manouria_impressa,
53 Platysternon_megacephalum,
54 Glyptemys_insculpta,
55 Glyptemys_muhlenbergii,
56 Emys_orbicularis,
57 Emydoidea_blandingii,
58 Terrapene_ornata,
59 Terrapene_coahuila,
60 Terrapene_carolina,
61 Clemmys_guttata,
62 Deirochelys_reticularia,
63 Trachemys_scripta,
64 Graptemys_geographica,
65 Graptemys_pseudogeographica,
66 Malaclemys_terrapin,
67 Chrysemys_picta,
68 Pseudemys_floridiana,
69 Pseudemys_concinna,
70 Rhinochelys_pulchriceps,
71 Desmatochelys_lowii,
72 Bouliachelys_suteri,
73 Nichollsemys_baieri,
74 Dermochelys_coriacea,
75 Allopleuron_hofmanni,
76 Argillochelys_antiqua,
77 Puppigerus_camperi,
78 Eochelone_brabantica,
79 Caretta_caretta,
80 Lepidochelys_olivacea,
81 Lepidochelys_kempii,
82 Eretmochelys_imbricata,
83 Chelonia_mydas,
84 Natator_depressus,
85 Chelydropsis_murchisoni,
86 Macrochelys_temminckii,
87 Chelydra_serpentina,
88 Dermatemys_mawii,
89 Staurotypus_salvinii,
90 Claudius_angustatus,
91 Sternotherus_minor,
92 Sternotherus_odoratus,
93 Kinosternon_subrubrum,
94 Kinosternon_baurii,
95 Kinosternon_scorpioides,
96 Kinosternon_hirtipes,
97 Adocus_lineolatus,
98 Basilemys_gaffneyi,
99 Carettochelys_insculpta,
100 Allaeochelys_libyca,
101 Petrochelys_kyrgyzensis,
102 Trionyx_triunguis,
103 Chitra_chitra,
104 Axestemys_infernalis,
105 Apalone_mutica,
106 Apalone_spinifera,
107 Amyda_cartilaginea,
108 Pelodiscus_sinensis,
109 Cycloderma_frenatum,
110 Cyclanorbis_senegalensis,
111 Lissemys_punctata,
112 Hydromedusa_tectifera,
113 Phrynops_hilarii,
114 Phrynops_geoffroanus,
115 Platemys_platycephala,
116 Chelus_fimbriatus,
117 Chelodina_oblonga,
118 Emydura_subglobosa,
119 Elseya_dentata,
120 Pelomedusa_subrufa,
121 Pelusios_niger,
122 Sahonachelys_mailakavava,
123 Galianemys_emringeri,
124 Galianemys_whitei,
125 Araiochelys_hirayamai,
126 Bothremys_maghrebiana,
127 Bothremys_cooki,
128 Labrostochelys_galkini,
129 Taphrosphys_ippolitoi,
130 Phosphatochelys_tedfordi,
131 Ummulisani_rutgersensis,
132 Hamadachelys_escuilliei,
133 Yuraramirim_montealtensis,
134 Lapparentemys_vilavilensis,
135 Podocnemis_expansa,
136 Podocnemis_unifilis,
137 Podocnemis_erythrocephala,
138 Peltocephalus_dumerilianus,
139 Latentemys_plowdeni,
140 Shweboemys_pilgrimi,
141 Stereogenys_cromeri,
142 Araripemys_barretoi,
143 Dirqadim_schaefferi
;
TREE * UNTITLED = [&R] (1:1,(2:1,(3:1,(4:5,((5:29.1,(6:1,(7:55.4,8:1):27.1):1):18.2,((9:1,10:73):98.2,((11:3.2,12:1):1,(13:19.9,(((14:30.7,15:1):2,((16:1,17:1):1,(18:2,(19:1,20:1):1):2.6):1):1,(((((((21:28.74999,22:28.74999):36.583134,(((23:34.880171,(24:19.095439,(25:16.61196,26:16.61196):2.483479):15.784732):7.431623,((27:34.979594,(28:33.218826,29:33.218826):1.760768):6.3322,30:41.311794):1):18.890118,(((31:33.708366,32:33.708366):16.597055,(33:45.022572,((34:34.598202,35:34.598202):5.992952,36:40.591154):4.431418):5.282849):7.537636,(37:50.975273,38:50.975273):6.867784):3.358855):4.131212):7.647458,(((((39:16.090969,40:16.090969):18.840885,41:34.931854):5.544124,(42:34.800053,43:34.800053):5.675925):12.296597,((44:41.862662,45:41.862662):2.928669,((46:38.625437,47:38.625437):5.165894,48:43.791331):1):7.981244):7.807032,((49:1,(50:27.264349,51:27.264349):7.735651):19.231778,52:54.231778):6.347829):12.400975):32.021031,(53:86.725049,(((54:13.294397,55:13.294397):17.603382,((56:17.116175,57:17.116175):10.119881,((58:14.080637,(59:9.990923,60:9.990923):4.089714):9.061112,61:23.141749):4.094307):3.661723):12.613431,(62:32.85982,((63:15.606505,((64:7.358462,65:7.358462):6.269459,66:13.627921):1.978584):8.243108,(67:16.022351,(68:2.838291,69:2.838291):13.18406):7.827262):9.010207):10.65139):43.213839):18.276564):12.998387,(((70:14.5,(71:16.8,72:1):1):1,(73:1,((74:73.1,75:1):1,((76:2,(77:1,78:9.2):1):1,(((79:15.425118,(80:4.193861,81:4.193861):11.231257):4.779615,82:20.204733):13.190177,(83:21.614294,84:21.614294):11.780616):25.60509):15.1):4.8):37.1):1,((85:4.312497,(86:26.342497,87:26.342497):1):67.054013,(88:74.479856,((89:24.19602,90:24.19602):30.738078,((91:21.632665,92:21.632665):8.382139,((93:17.357205,94:17.357205):6.35837,(95:12.995649,96:12.995649):10.719926):6.299229):24.919294):19.545758):19.916654):22.60349):1):1,((97:7,98:1):38.4,((99:16.97,100:1):98.03,(101:1,(((102:72.281042,103:72.281042):1.318958,((104:1,(105:23.979579,106:23.979579):47.620421):1,(107:54.647209,108:54.647209):17.952791):1):29.591877,((109:43.043612,110:43.043612):9.561175,111:52.604787):50.58709):10.808123):1):1):3):27.20000002,(((112:98.719042,((113:56.941961,(114:51.793959,115:51.793959):5.148002):10.467131,116:67.409092):31.30995):18.005685,(117:103.837351,(118:39.304405,119:39.304405):64.532946):12.887376):28.47527302,(((120:61.529498,121:61.529498):75.77050202,(122:64.20000002,(((123:6.945833351,124:6.945833351):11.3375,((125:28.86666668,(126:12.20000002,127:6.10000002):16.66666666):1,(128:2,(129:1,(130:3.154166685,131:3.154166685):7.845833315):1):27.86666668):22.91666667):1,(132:9.489583355,((133:1,134:18.6):19.190039,((135:46.862087,(136:29.859589,137:29.859589):17.002498):55.927952,(138:52.61973961,(139:9.741053263,(140:23.77,141:1):3.671053263):19.84868634):50.1702994):1):6.199544355):9.793749996):16.51666667):1):6.9,(142:24.46666669,143:32.46666669):6.733333333):1):1):12.49999998):1):10.6):1):1):1):27):2.3):6.9);
END;