Contrast Optimized Stimulation generator
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Updated
Oct 9, 2017 - Python
Contrast Optimized Stimulation generator
Extracts metadata of files in Dicom and Nifti format and prints it to the screen.
Package for obtaining the referential signal from a set of unipolar iEEG data
Python wrapper for GENIA tagger
Deep Learning architectures for the fascinating task of sentence selection for QA systems.
Large-scale Exploration of Neural Relation Classification Architectures
Full abstract relation extraction from biological texts with bi-affine relation attention networks
Classification of Biomedical Questions from the BioASQ Challenge - Task 6b, adding co-training with Quora questions
Toolkit for the Empirical Design of Stereotactic Brain Implants
This repository contains data and BioBert based NER model monologg/biobert_v1.1_pubmed from community-uploaded Hugging Face models for detecting entities such as chemical and disease.
Behavioral data analysis and plotting in Python.
A brain MRI segmentation tool that provides accurate robust segmentation of problematic brain regions across the neurodegenerative spectrum. The methodology is generalisable to perform well with the typical variance in MRI acquisition parameters and other factors that influence image contrast.
Machine learning using k-means clustering, to group gene expression and patient sub-type in Breast Cancer patients
Segmentation of nuclei in histopathology images of kidney tissues using UNet and UNetPPL
Courseworks of CS5550 Computational Methods for Biomedical Image Analysis, NTHU.
Implementation for the DATABASE paper "Building Deep Learning Models for Evidence Classification from the Open Access Biomedical Literature"
Annotation tool to help create human pose datasets for Machine Learning Models
SleepEEGNet: Automated Sleep Stage Scoring with Sequence to Sequence Deep Learning Approach
This repository contains the code accompanying the paper "Learning Informative Representations of Biomedical Relations with Latent Variable Models", Harshil Shah and Julien Fauqueur, EMNLP SustaiNLP 2020.
Course Content, Outline and Codes for Biomedical Engineering batch 2017, NED University of Engineering and Technology.
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