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Snakemake workflow for Bulk RNASeq at both genome level and transcripts level.
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Mar 31, 2022 - R
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Mar 1, 2023 - JavaScript
RNA sequencing processing and analysis to find differential expression
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Jun 29, 2023 - Jupyter Notebook
Config files for my GitHub profile.
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Jun 27, 2023
Perform RNA-seq data analysis with edgeR package of bioconductor
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Feb 27, 2023 - R
Rstudio files created during my internship at IAB. Internship supervised by Florent Chuffart.
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Apr 12, 2022 - R
A large-scale spectral counting data analysis using PAW pipeline, edgeR, R, and Jupyter notebooks
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Sep 6, 2019 - Jupyter Notebook
Transcriptome Analysis of Heat and Drought-Stressed Wheat
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Oct 15, 2022 - Jupyter Notebook
The Tasmanian devil is endangered due to Devil Facial Tumour Disease (DFTD), a contagious cancer with no current treatment. Previous study has investigated the anticancer properties of Tasmanian devil cathelicidins. This report intends to reproduce the enrichment analysis results of the study and further analyze their data.
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Aug 6, 2024 - TeX
Sea lion urine comparison with spectral counting.
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Sep 2, 2019 - HTML
Galaxy wrappers for SARTools (Statistical Analysis of RNA-Seq Tools)
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Jan 6, 2021 - R
Analyses combining ATAC-seq, RRBS, and RNA-seq data for purple urchins
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Mar 13, 2023 - R
Some of the analytical processes and tools we use to provide rigorous and actionable results to our clients.
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Nov 2, 2020 - R
Some of the analytical processes and tools we use to provide rigorous and actionable results to our clients.
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Mar 21, 2023 - R
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