Java toolkit for multi-threaded preprocessing of extremely large .fastq files in the GBS Pipeline by demultiplexing, filtering, and trimming sequenced DNA.
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Updated
Dec 6, 2018 - Java
Java toolkit for multi-threaded preprocessing of extremely large .fastq files in the GBS Pipeline by demultiplexing, filtering, and trimming sequenced DNA.
pipeline to perform gbs and genetic fitness analysis
Snake Genotyping By Sequencing. A reimplementation of Fast-GBS using snakemake.
Small .gbs chiptune player for Linux and Windows
Modul 152 Multimediainhalte in Webauftritt integrieren
A set of job submission scripts to run STACKS (http://catchenlab.life.illinois.edu/stacks/) on a computer cluster with TORQUE/MAUI scheduler. All the files were used to generate GBS data analyses published on the manuscript
Translation project for Them's Fightin' Herds
grur: an R package tailored for RADseq data imputations
Python scripts for performing bioinformatics for small read sequence alignment to reference genomes and SNP marker calling.
Code used for a RADseq/GBS (or, more generally, reduced representation sequencing) optimization pilot experiment with several Antarctic animal species.
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