gwas-summary-statistics
Here are 31 public repositories matching this topic...
Tool for integrative gene-based association analysis using GWAS summary stats
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Aug 28, 2019 - C++
Easy and simple mendelian randomization pipeline using GWAS summary statistics.
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Dec 23, 2019 - Shell
MultiVariate Polygenic Mixture Model
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Apr 4, 2020 - R
A Recalibrated Hypothesis Test for SNP-Level Summary Statistics
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Jul 2, 2020 - R
Python package for reading, combining, meta-analyzing, and saving GWAS summary statistics data.
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Jan 14, 2021 - Python
Polygenic risk modeling with latent trait-related genetic components
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Feb 23, 2021 - Jupyter Notebook
Explore SNVs associated with any of UK BioBank Phenotypes, results were made publicly available by: http://www.nealelab.is/uk-biobank
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Sep 10, 2021 - R
Script for designing a manhattan plot.
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Oct 9, 2021 - Python
A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics
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Mar 26, 2022 - R
Joint meta-analysis of 2-df gene and gene-environment tests in GWAS.
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May 5, 2022 - R
A simple GWAS parser + CLI
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Jul 18, 2022 - Python
Tools for preprocessing, QC, and preliminary analyses from raw UK BioBank data
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Aug 5, 2022 - Jupyter Notebook
GWAS summary statistics files QC tool
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Sep 2, 2022 - Python
A collection of Go scripts to create a database of potential somatic artifacts in the TOPMed germline calls.
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Jan 2, 2023 - Go
A web service to upload and share GWAS results with LocusZoom.js
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Feb 2, 2023 - Python
Make interactive LocusZoom plots from a local GWAS file
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Mar 4, 2023 - Vue
A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.
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Mar 15, 2023 - JavaScript
BWMR (Bayesian Weighted Mendelian Randomization)
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Jun 14, 2023 - R
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