A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.
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Updated
Mar 15, 2023 - JavaScript
A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.
Older repo for MRLocus. See new website for software usage guide:
Tool for integrative gene-based association analysis using GWAS summary stats
GWAS summary statistics files QC tool
A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics
Make interactive LocusZoom plots from a local GWAS file
Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)
MultiVariate Polygenic Mixture Model
BWMR (Bayesian Weighted Mendelian Randomization)
Script for designing a manhattan plot.
Code and simulations using interaction-LD score regression
Joint meta-analysis of 2-df gene and gene-environment tests in GWAS.
tool for probabilistic correction of Winner's Curse in two-stage GWAS
A Recalibrated Hypothesis Test for SNP-Level Summary Statistics
Easy and simple mendelian randomization pipeline using GWAS summary statistics.
A collection of Go scripts to create a database of potential somatic artifacts in the TOPMed germline calls.
Explore SNVs associated with any of UK BioBank Phenotypes, results were made publicly available by: http://www.nealelab.is/uk-biobank
R code used for the master thesis entitled "Germline variants associated with prognosis of patients with non muscle invasive bladder cancer".
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