For shallow-water Lagrangian particle routing.
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Updated
Jun 20, 2023 - Python
For shallow-water Lagrangian particle routing.
A fast tracking code for plasma accelerators
Suite of python packages for multiparticle simulations of particle accelerators.
Python library unifying Positron Emission Particle Tracking (PEPT) research, including tracking, simulation, data analysis and visualisation tools.
Particle Tracking Module for Python
MoTT is the official repository of the paper "A Motion Transformer for Single Particle Tracking in Fluorescence Microscopy Images".
An automated tool for Object-based colocalization in fluorescence microscopy images.
Recognising charged oil drops in Millikan's oil drop experiment
Computer vision for particle trajectories.
A Flika plugin. A clone of Insight2 in Python. This can be used to analyze 2D STORM microscopy movies.
Track moving and rotating particles from video files.
These are python version of codes that I wrote to analyze images and videos of a macromolecule, that I took via fluorescence microscopy, in my research in grad school.
Code and model weights for YOLOv3 trained for particle tracking on simulated data generated with the library Deeptrack. The code for simulating the training data is also found in this repository.
ParticleStats: Open source software for the analysis of intracellular particle motility and cytoskeletal polarity
Simple Particle Tracking Script in Python for Brownian Motion. Calculating the trajectories, MSD and radius of particles.
Code to identify, track, analyse and visualize particle trajectories from video files for Bernal et al. (2022).
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