Paper list of single cell omics
-
Updated
Aug 27, 2019
Paper list of single cell omics
Material for Advanced Sequencing Technologies pratical on scATAC-seq
A single-cell ATAC-seq simulation framework (R package)
It contains the functional code to analyze P2 scRNA-seq and scATAC-seq data.
Programming in practice based on RNA-seq, scRNA-seq, ATAC-seq, scATAC-seq or ChIP-seq.
R package for single-cell comparative regulatory analysis
Code related to Swanson, et. al. for TEA-seq, ICICLE-seq, and scATAC-seq data processing, analysis, and visualization
A crash course in scATAC-seq data processing
STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data
Comparison of different classifiers used to model the accessibility of chromatin in mouse brain cells.
CWL toolkit for single-cell sequencing data analysis
Accurate and fast cell marker gene identification with COSG
This repository is for male breast cancer scRNA-seq and scATAC-seq data processing and figure generation.
resVAE-ensemble: feature identification in single-cell data
This repository contains a pipeline for analyzing data from scATAC-seq.
Single-cell Transcriptome and Regulome Analysis Pipeline
scripts for manuscript 'benchmarking automated cell type annotation tools for single-cell ATAC-seq data'
Add a description, image, and links to the scatac-seq topic page so that developers can more easily learn about it.
To associate your repository with the scatac-seq topic, visit your repo's landing page and select "manage topics."