From 068537240e08d914ca6cf7ceb1a30333739439be Mon Sep 17 00:00:00 2001 From: dweemx Date: Thu, 14 May 2020 00:57:47 +0200 Subject: [PATCH] Update Dockerfile; Bump container version from 0.1.0 to 0.2.0 --- Dockerfile | 6 +++--- pcacv.config | 2 +- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/Dockerfile b/Dockerfile index f65fcf1..984df61 100644 --- a/Dockerfile +++ b/Dockerfile @@ -4,10 +4,10 @@ RUN apt-get -y update && \ apt-get install -y libcurl4-openssl-dev libxml2-dev zlib1g-dev libhdf5-dev && \ apt-get install -y libssl-dev && \ # png.h: No such file or directory - apt-get install -y libpng-dev && \ + apt-get install -y libpng-dev && \ + R -e "install.packages('doFuture')" && \ + R -e "install.packages('doRNG')" && \ R -e "install.packages('optparse')" && \ - R -e "install.packages('foreach')" && \ - R -e "install.packages('doMC')" && \ R -e "install.packages('dismo')" && \ R -e "devtools::install_github(repo = 'aertslab/SCopeLoomR')" && \ # Need to run ps diff --git a/pcacv.config b/pcacv.config index 3b5bd17..26794c1 100644 --- a/pcacv.config +++ b/pcacv.config @@ -1,7 +1,7 @@ params { pcacv { - container = "vibsinglecellnf/pcacv:0.1.0" + container = "vibsinglecellnf/pcacv:0.2.0" find_optimal_npcs { accessor = '@assays$RNA@scale.data' // useVariableFeatures = true // or false