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@Cellular-Semantics

Cellular Semantics

Home of the Cellular Semantics Group in Cellular Genetics at the Welcome Sanger Institute

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  1. CellMark CellMark Public

    Makefile 1 1

  2. whole_mouse_brain_ontology whole_mouse_brain_ontology Public

    A data-driven cell-type ontology of the whole mouse brain.

    Python

  3. whole_human_brain_ontology whole_human_brain_ontology Public

    A data-driven cell-type ontology of the human brain.

    Python

  4. obask_demo_pipeline obask_demo_pipeline Public

    Python

  5. cellxgene-cell-reporter cellxgene-cell-reporter Public

    Reports Cell Ontology terms referenced within CellxGene

    Python

  6. CL_KG CL_KG Public

    Building a Cell Ontology Knowledge-Base from data, and LLMs

    Python

Repositories

Showing 10 of 20 repositories
  • cellxgene-cell-reporter Public

    Reports Cell Ontology terms referenced within CellxGene

    Cellular-Semantics/cellxgene-cell-reporter’s past year of commit activity
    Python 0 0 0 0 Updated Oct 1, 2024
  • obask_demo_pipeline Public
    Cellular-Semantics/obask_demo_pipeline’s past year of commit activity
    Python 0 0 0 0 Updated Sep 30, 2024
  • CL_KG Public

    Building a Cell Ontology Knowledge-Base from data, and LLMs

    Cellular-Semantics/CL_KG’s past year of commit activity
    Python 0 Apache-2.0 0 6 0 Updated Sep 27, 2024
  • cas_linkml_notebooks Public

    A set of notebooks for experiments

    Cellular-Semantics/cas_linkml_notebooks’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Sep 25, 2024
  • cell-annotation-schema Public
    Cellular-Semantics/cell-annotation-schema’s past year of commit activity
    Python 0 GPL-3.0 0 4 0 Updated Sep 25, 2024
  • whole_mouse_brain_taxonomy Public

    Atlas of whole mouse brain

    Cellular-Semantics/whole_mouse_brain_taxonomy’s past year of commit activity
    HTML 0 0 0 0 Updated Sep 24, 2024
  • CellMark Public
    Cellular-Semantics/CellMark’s past year of commit activity
    Makefile 1 1 1 1 Updated Sep 19, 2024
  • lung_demo Public
    Cellular-Semantics/lung_demo’s past year of commit activity
    Python 0 0 1 0 Updated Sep 13, 2024
  • MapMyCells_scratch Public

    scratch repo for working on map may cells to CAS

    Cellular-Semantics/MapMyCells_scratch’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Jul 30, 2024
  • CL_Markers_Mappings Public

    Maps gene markers in CL to various external databases

    Cellular-Semantics/CL_Markers_Mappings’s past year of commit activity
    Python 0 0 0 0 Updated Jul 2, 2024
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