Clean up some environments

This commits removes some of the unused dependencies in various environments.

It also removes the direct dependency on CUDA and MPI (as for ClimaComms 0.6)

.buildkite/amip/pipeline.yml

@@ -20,14 +20,12 @@ steps:
 
       - echo "--- Instantiate AMIP env"
       - "julia --project=experiments/ClimaEarth/ -e 'using Pkg; Pkg.instantiate(;verbose=true)'"
+      - "julia --project=experiments/ClimaEarth/ -e 'using Pkg; Pkg.add(\"MPI\"); Pkg.add(\"CUDA\")'"
       - "julia --project=experiments/ClimaEarth/ -e 'using Pkg; Pkg.precompile()'"
       - "julia --project=experiments/ClimaEarth/ -e 'using Pkg; Pkg.status()'"
 
       - echo "--- Download artifacts"
-      - "julia --project=artifacts -e 'using Pkg; Pkg.instantiate(;verbose=true)'"
-      - "julia --project=artifacts -e 'using Pkg; Pkg.precompile()'"
-      - "julia --project=artifacts -e 'using Pkg; Pkg.status()'"
-      - "julia --project=artifacts artifacts/download_artifacts.jl"
+      - "julia --project=experiments/ClimaEarth/ artifacts/download_artifacts.jl"
 
     agents:
       slurm_gpus: 1

.buildkite/benchmarks/pipeline.yml

@@ -17,20 +17,19 @@ steps:
     command:
       - echo "--- Instantiate experiments/ClimaEarth"
       - julia --project=experiments/ClimaEarth -e 'using Pkg; Pkg.instantiate(;verbose=true)'
+      - julia --project=experiments/ClimaEarth -e 'using Pkg; Pkg.add("MPI"); Pkg.add("CUDA")'
       - julia --project=experiments/ClimaEarth -e 'using Pkg; Pkg.precompile()'
       - julia --project=experiments/ClimaEarth -e 'using Pkg; Pkg.status()'
 
       - echo "--- Instantiate test env"
       - "julia --project=test/ -e 'using Pkg; Pkg.develop(path=\".\")'"
+      - "julia --project=test/ -e 'using Pkg; Pkg.add(\"MPI\"); Pkg.add(\"CUDA\")'"
       - "julia --project=test/ -e 'using Pkg; Pkg.instantiate(;verbose=true)'"
       - "julia --project=test/ -e 'using Pkg; Pkg.precompile()'"
       - "julia --project=test/ -e 'using Pkg; Pkg.status()'"
 
       - echo "--- Download artifacts"
-      - "julia --project=artifacts -e 'using Pkg; Pkg.instantiate(;verbose=true)'"
-      - "julia --project=artifacts -e 'using Pkg; Pkg.precompile()'"
-      - "julia --project=artifacts -e 'using Pkg; Pkg.status()'"
-      - "julia --project=artifacts artifacts/download_artifacts.jl"
+      - "julia --project=experiments/ClimaEarth artifacts/download_artifacts.jl"
 
     agents:
       slurm_gpus: 1

.buildkite/hierarchies/pipeline.yml

@@ -25,14 +25,12 @@ steps:
 
       - echo "--- Instantiate AMIP env"
       - "julia --project=experiments/ClimaEarth/ -e 'using Pkg; Pkg.instantiate(;verbose=true)'"
+      - "julia --project=experiments/ClimaEarth/ -e 'using Pkg; Pkg.add(\"MPI\"); Pkg.add(\"CUDA\")'"
       - "julia --project=experiments/ClimaEarth/ -e 'using Pkg; Pkg.precompile()'"
       - "julia --project=experiments/ClimaEarth/ -e 'using Pkg; Pkg.status()'"
 
       - echo "--- Download artifacts"
-      - "julia --project=artifacts -e 'using Pkg; Pkg.instantiate(;verbose=true)'"
-      - "julia --project=artifacts -e 'using Pkg; Pkg.precompile()'"
-      - "julia --project=artifacts -e 'using Pkg; Pkg.status()'"
-      - "julia --project=artifacts artifacts/download_artifacts.jl"
+      - "julia --project=experiments/ClimaEarth/ artifacts/download_artifacts.jl"
 
     agents:
       queue: clima
@@ -106,4 +104,4 @@ steps:
           queue: clima
           slurm_mem: 20GB
           slurm_gpus: 1
-          modules: common
+          modules: common

.buildkite/pipeline.yml

@@ -35,37 +35,39 @@ steps:
 
       - echo "--- Instantiate sea breeze env"
       - "julia --project=experiments/ClimaCore/sea_breeze -e 'using Pkg; Pkg.instantiate(;verbose=true)'"
+      - "julia --project=experiments/ClimaCore/sea_breeze -e 'using Pkg; Pkg.add(\"MPI\"); Pkg.add(\"CUDA\")'"
       - "julia --project=experiments/ClimaCore/sea_breeze -e 'using Pkg; Pkg.precompile()'"
       - "julia --project=experiments/ClimaCore/sea_breeze -e 'using Pkg; Pkg.status()'"
 
       - echo "--- Instantiate climacore exp env"
       - "julia --project=experiments/ClimaCore/ -e 'using Pkg; Pkg.instantiate(;verbose=true)'"
+      - "julia --project=experiments/ClimaCore/ -e 'using Pkg; Pkg.add(\"MPI\"); Pkg.add(\"CUDA\")'"
       - "julia --project=experiments/ClimaCore/ -e 'using Pkg; Pkg.precompile()'"
       - "julia --project=experiments/ClimaCore/ -e 'using Pkg; Pkg.status()'"
 
       - echo "--- Instantiate ClimaEarth env"
       - "julia --project=experiments/ClimaEarth/ -e 'using Pkg; Pkg.develop(path=\".\")'"
       - "julia --project=experiments/ClimaEarth/ -e 'using Pkg; Pkg.instantiate(;verbose=true)'"
+      - "julia --project=experiments/ClimaEarth/ -e 'using Pkg; Pkg.add(\"MPI\"); Pkg.add(\"CUDA\")'"
       - "julia --project=experiments/ClimaEarth/ -e 'using Pkg; Pkg.precompile()'"
       - "julia --project=experiments/ClimaEarth/ -e 'using Pkg; Pkg.status()'"
 
       - echo "--- Instantiate perf env"
       - "julia --project=perf/ -e 'using Pkg; Pkg.develop(path=\".\")'"
       - "julia --project=perf/ -e 'using Pkg; Pkg.instantiate(;verbose=true)'"
+      - "julia --project=perf/ -e 'using Pkg; Pkg.add(\"MPI\"); Pkg.add(\"CUDA\")'"
       - "julia --project=perf/ -e 'using Pkg; Pkg.precompile()'"
       - "julia --project=perf/ -e 'using Pkg; Pkg.status()'"
 
       - echo "--- Instantiate test env"
       - "julia --project=test/ -e 'using Pkg; Pkg.develop(path=\".\")'"
       - "julia --project=test/ -e 'using Pkg; Pkg.instantiate(;verbose=true)'"
+      - "julia --project=test/ -e 'using Pkg; Pkg.add(\"MPI\"); Pkg.add(\"CUDA\")'"
       - "julia --project=test/ -e 'using Pkg; Pkg.precompile()'"
       - "julia --project=test/ -e 'using Pkg; Pkg.status()'"
 
       - echo "--- Download artifacts"
-      - "julia --project=artifacts -e 'using Pkg; Pkg.instantiate(;verbose=true)'"
-      - "julia --project=artifacts -e 'using Pkg; Pkg.precompile()'"
-      - "julia --project=artifacts -e 'using Pkg; Pkg.status()'"
-      - "julia --project=artifacts artifacts/download_artifacts.jl"
+      - "julia --project=experiments/ClimaEarth/ artifacts/download_artifacts.jl"
 
     concurrency: 1
     concurrency_group: 'depot/climacoupler-ci'

Project.toml

@@ -4,36 +4,26 @@ authors = ["CliMA Contributors <clima-software@caltech.edu>"]
 version = "0.1.1"
 
 [deps]
-CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba"
 ClimaComms = "3a4d1b5c-c61d-41fd-a00a-5873ba7a1b0d"
 ClimaCore = "d414da3d-4745-48bb-8d80-42e94e092884"
 ClimaCoreTempestRemap = "d934ef94-cdd4-4710-83d6-720549644b70"
 Dates = "ade2ca70-3891-5945-98fb-dc099432e06a"
-DocStringExtensions = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"
 JLD2 = "033835bb-8acc-5ee8-8aae-3f567f8a3819"
 NCDatasets = "85f8d34a-cbdd-5861-8df4-14fed0d494ab"
-Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
 SciMLBase = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
 StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
-Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
 SurfaceFluxes = "49b00bb7-8bd4-4f2b-b78c-51cd0450215f"
-TempestRemap_jll = "8573a8c5-1df0-515e-a024-abad257ee284"
 Thermodynamics = "b60c26fb-14c3-4610-9d3e-2d17fe7ff00c"
 
 [compat]
-CUDA = "5"
 ClimaComms = "0.5.6, 0.6"
 ClimaCore = "0.14.6"
 ClimaCoreTempestRemap = "0.3"
 Dates = "1"
-DocStringExtensions = "0.8, 0.9"
 JLD2 = "0.4"
 NCDatasets = "0.11, 0.12, 0.13, 0.14.2"
-Plots = "1.39.0"
 SciMLBase = "1, 2"
 StaticArrays = "1"
-Statistics = "1"
 SurfaceFluxes = "0.11"
-TempestRemap_jll = "2"
 Thermodynamics = "0.12.4"
 julia = "1.8"

docs/src/conservation.md

@@ -12,10 +12,9 @@ Note that kinetic energy is not included in the calculation of the global energy
 ClimaCoupler.ConservationChecker.EnergyConservationCheck
 ClimaCoupler.ConservationChecker.WaterConservationCheck
 ClimaCoupler.ConservationChecker.check_conservation!
-ClimaCoupler.ConservationChecker.plot_global_conservation
 ```
 
 ## ConservationChecker Internal Functions
 ```@docs
 ClimaCoupler.ConservationChecker.surface_water_gain_from_rates
-```
+```