Address small reviewer comments

MDAnalysis · Jun 21, 2023 · fbc491b · fbc491b
1 parent e948b86
commit fbc491b
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Showing 2 changed files with 6 additions and 9 deletions.
diff --git a/package/MDAnalysis/coordinates/chain.py b/package/MDAnalysis/coordinates/chain.py
@@ -318,7 +318,7 @@ def __init__(self, filenames, skip=1, dt=None, continuous=False,
             times = []
             for r in self.readers:
                 r[0]
-                start = r.ts.time 
+                start = r.ts.time
                 r[-1]
                 end = r.ts.time
                 times.append((start, end))
@@ -341,21 +341,21 @@ def __init__(self, filenames, skip=1, dt=None, continuous=False,
             n_frames = 0
             for r1, r2 in zip(self.readers[:-1], self.readers[1:]):
                 r2[0], r1[0]
-                r1_start_time = r1.ts.time
-                start_time = r2.ts.time
+                r1_start_time = r1.time
+                start_time = r2.time
                 r1[-1]
-                if r1.ts.time < start_time:
+                if r1.time < start_time:
                     warnings.warn("Missing frame in continuous chain", UserWarning)
 
                 # check for interleaving
                 r1[1]
-                if r1_start_time < start_time < r1.ts.time:
+                if r1_start_time < start_time < r1.time:
                     raise RuntimeError("ChainReader: Interleaving not supported "
                                        "with continuous=True.")
 
                 # find end where trajectory was restarted from
                 for ts in r1[::-1]:
-                    if r1.ts.time < start_time:
+                    if ts.time < start_time:
                         break
                 sf.append(sf[-1] + ts.frame + 1)
                 n_frames += ts.frame + 1

diff --git a/testsuite/MDAnalysisTests/datafiles.py b/testsuite/MDAnalysisTests/datafiles.py
@@ -151,9 +151,6 @@
     "LAMMPSDUMP_long",  # lammpsdump file with a few zeros sprinkled in the first column first frame
     "LAMMPSDUMP_allcoords",  # lammpsdump file with all coordinate conventions (x,xs,xu,xsu) present, from LAMMPS rdf example
     "LAMMPSDUMP_nocoords",  # lammpsdump file with no coordinates
-    "LAMMPSDUMP_chain1", # Lammps dump file with chain reader
-    "LAMMPSDUMP_chain2", # Lammps dump file with chain reader
-    "LAMMPS_chain", # Lammps data file with chain reader
     "LAMMPSDUMP_triclinic",  # lammpsdump file to test triclinic dimension parsing, albite with most atoms deleted
     "LAMMPSDUMP_image_vf",  # Lammps dump file with image flags, velocities, and forces.
     "LAMMPS_image_vf",  # Lammps data file to go with LAMMPSDUMP_image_vf