fix: snpeff executable name

RIVM-bioinformatics · Jul 4, 2023 · 2b9af66 · 2b9af66
1 parent 06482cd
commit 2b9af66
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/workflow/rules/mtb_prepare_files.smk b/workflow/rules/mtb_prepare_files.smk
@@ -172,7 +172,7 @@ WORKDIR=$(dirname {input.config})
 CONFIG_NAME=$(basename {input.config})
 DB_NAME=$(basename {input.db_dir})
 cd $WORKDIR
-snpEff build -genbank -v $DB_NAME -config $CONFIG_NAME -dataDir . 2>&1>{log} 
+snpeff build -genbank -v $DB_NAME -config $CONFIG_NAME -dataDir . 2>&1>{log} 
         """