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Converts a GenBank file (*.gbk) to an NCBI Protein Table (*.ptt) file

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gbk2ptt

Converts a GenBank file (.gbk) to an NCBI Protein Table (.ptt) file

Note: This repository contains all the code to run on a webserver. If running locally, you only need the GBKtoPTT.pl file.

Requirements

  • Perl (ActivePerl for Windows may work)
  • BioPerl

How to Run

perl GBKtoPTT.pl < [yourgbkfile.gbk] > [yourdesiredoutputfile.ptt]

Acknowledgements

GBKtoPTT.pl was written by Torsten Seemann

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Converts a GenBank file (*.gbk) to an NCBI Protein Table (*.ptt) file

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