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Add gomc parser #78

Merged
merged 29 commits into from
Jul 30, 2019
Merged

Add gomc parser #78

merged 29 commits into from
Jul 30, 2019

Commits on Apr 27, 2019

  1. Add gomc parser

    @msoroush
    msoroush committed Apr 27, 2019
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Commits on May 3, 2019

  1. Use time as index name and column name to be able to use preprocessin… 

    …g module.
    @msoroush
    msoroush committed May 3, 2019
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Commits on May 6, 2019

  1. Removing the _extract_legend function.

    @msoroush
    msoroush committed May 6, 2019
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Commits on Jul 18, 2019

  1. add AUTHORS and CHANGES 

    - close alchemistry#83
- close alchemistry#84
- files were manually created based on the history (git log --format="format:%an %ad" --date="format:%Y" 0.1.0..HEAD | sort | uniq)
  and the merged PRs and closed issues
    @orbeckst
    orbeckst committed Jul 18, 2019
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Commits on Jul 19, 2019

  1. Merge branch 'master' into master

    @orbeckst
    orbeckst authored Jul 19, 2019
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Commits on Jul 22, 2019

  1. Add parsing test for GOMC

    @msoroush
    msoroush committed Jul 22, 2019
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  2. Merge branch 'master' of https://github.com/msoroush/alchemlyb

    @msoroush
    msoroush committed Jul 22, 2019
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  3. Add test for GOMC parser, TI, BAR, and MBAR estimator

    @msoroush
    msoroush committed Jul 22, 2019
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  4. Fix the missing parentheses in test_ti_estimators

    @msoroush
    msoroush committed Jul 22, 2019
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Commits on Jul 24, 2019

  1. add NAMD parser to CHANGES

    @orbeckst
    orbeckst authored Jul 24, 2019
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  2. resolve the conflict

    @msoroush
    msoroush committed Jul 24, 2019
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  3. The gmx _extract_dataframe function now drops duplicate columns

    @dotsdl
    dotsdl committed Jul 24, 2019
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  4. Merge branch 'master' into gmx-drop-duplicates

    @dotsdl
    dotsdl committed Jul 24, 2019
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  5. Update AUTHORS, CHANGES

    @msoroush
    msoroush committed Jul 24, 2019
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  6. Merge branch 'update-authors-changes'

    @msoroush
    msoroush committed Jul 24, 2019
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  7. Merge remote-tracking branch 'upstream/gmx-drop-duplicates'

    @msoroush
    msoroush committed Jul 24, 2019
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  8. Fix the gomc parser for dHdl

    @msoroush
    msoroush committed Jul 24, 2019
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  9. Fix the gomc FEP test

    @msoroush
    msoroush committed Jul 24, 2019
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  10. Update the std deviation of MBAR and TI for gomc benzene data sets.

    @msoroush
    msoroush committed Jul 24, 2019
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Commits on Jul 25, 2019

  1. Merge branch 'master' into master

    @orbeckst
    orbeckst authored Jul 25, 2019
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Commits on Jul 26, 2019

  1. Update the parsing documentation. Update the variable names in gomc p… 

    …arser
    @msoroush
    msoroush committed Jul 26, 2019
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  2. Merge branch 'master' into master

    @orbeckst
    orbeckst authored Jul 26, 2019
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  3. Update gomc parser

    @msoroush
    msoroush committed Jul 26, 2019
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  4. Merge branch 'master' of https://github.com/msoroush/alchemlyb

    @msoroush
    msoroush committed Jul 26, 2019
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Commits on Jul 28, 2019

  1. Small tweaks to gomc parser; no major changes

    @dotsdl
    dotsdl committed Jul 28, 2019
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  2. Merge remote-tracking branch 'msoroush/master' into msoroush-master

    @dotsdl
    dotsdl committed Jul 28, 2019
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  3. Updated test to match *-lambda index names

    @dotsdl
    dotsdl committed Jul 28, 2019
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  4. Merge branch 'master' into msoroush-master

    @dotsdl
    dotsdl committed Jul 28, 2019
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Commits on Jul 30, 2019

  1. Merge branch 'master' into master

    @orbeckst
    orbeckst authored Jul 30, 2019
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