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Fix CI.
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Clemens Messerschmidt committed Feb 1, 2019
1 parent 45694fd commit 2768d2a
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Showing 2 changed files with 3 additions and 3 deletions.
2 changes: 1 addition & 1 deletion digestiflow_demux/tests/test_bases_mask.py
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Expand Up @@ -4,7 +4,7 @@
split_bases_mask,
compare_bases_mask,
return_bases_mask,
BaseMaskConfigException
BaseMaskConfigException,
)


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4 changes: 2 additions & 2 deletions digestiflow_demux/wrappers/bcl2fastq2/wrapper.py
Original file line number Diff line number Diff line change
Expand Up @@ -17,8 +17,8 @@
# More than 8 threads will not work for bcl2fastq.
bcl2fastq_threads = min(8, snakemake.config["cores"]) # noqa

if snakemake.params.read_structure:
bases_mask = "--use-bases-mask " + snakemake.params.read_structure
if snakemake.params.read_structure: # noqa
bases_mask = "--use-bases-mask " + snakemake.params.read_structure # noqa
else:
bases_mask = ""

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