Merge branch 'main' into add-case-synonyms

.bumpversion.cfg

@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 0.10.86-dev
+current_version = 0.10.135-dev
 commit = True
 tag = False
 parse = (?P<major>\d+)\.(?P<minor>\d+)\.(?P<patch>\d+)(?:-(?P<release>[0-9A-Za-z-]+(?:\.[0-9A-Za-z-]+)*))?(?:\+(?P<build>[0-9A-Za-z-]+(?:\.[0-9A-Za-z-]+)*))?

.github/ISSUE_TEMPLATE/new-prefix.yml

@@ -42,7 +42,7 @@ body:
   - type: input
     id: repository
     attributes:
-      label: Repository
+      label: Source Code Repository
       description: |
         What is the version control repository associated with this prefix?
 
@@ -64,6 +64,14 @@ body:
       description: |
         What is the repository's license? Write with a SPDX identifier, if possible.
       placeholder: ex. CC0
+  - type: input
+    id: publications
+    attributes:
+      label: Publications
+      description: |
+        If you have a PubMed identifier, PMC identifier, or DOI with an article associated with this resource, please put it here. Please write publications using CURIE syntax. Please delimit multiple unique publications with a pipe "|" character. You only need one CURIE for each publication.
+      placeholder: ex. doi:10.1101/2022.07.08.499378 | pubmed:33290552 | pmc:PMC4383985
+
   - type: input
     id: example
     attributes:
@@ -129,7 +137,13 @@ body:
       placeholder: ex. 0000-0003-4423-4370
     validations:
       required: true
-
+  - type: input
+    id: contributor_email
+    attributes:
+      label: Contributor Email
+      description: Please provide your email address (optional) so others can contact you regarding your contribution
+      placeholder: ex. cthoyt@gmail.com
+
   - type: input
     id: contact_name
     attributes:

README.md

@@ -415,7 +415,7 @@ $ bioregistry web
 ```
 
 to run a web app that functions like Identifiers.org, but backed by the Bioregistry.
-A public instance of this app is hosted by the [INDRA Lab](https://indralab.github.io) at
+A public instance of this app is hosted by the [Gyori Lab for Computational Biomedicine](https://gyorilab.github.io) at
 https://bioregistry.io.
 
 ## 👋 Attribution
@@ -476,11 +476,14 @@ Talks on the Bioregistry:
 
 ### 🎁 Support
 
-The Bioregistry was developed by the [INDRA Lab](https://indralab.github.io), a part of the
+The Bioregistry was primarily developed by the [Gyori Lab for Computational Biomedicine](https://gyorilab.github.io)
+at Northeastern University, which was previously a part of the
 [Laboratory of Systems Pharmacology](https://hits.harvard.edu/the-program/laboratory-of-systems-pharmacology/about/)
-and the [Harvard Program in Therapeutic Science (HiTS)](https://hits.harvard.edu)
+in the [Harvard Program in Therapeutic Science (HiTS)](https://hits.harvard.edu)
 at [Harvard Medical School](https://hms.harvard.edu/).
 
 ### 💰 Funding
 
-The development of the Bioregistry is funded by the DARPA Young Faculty Award W911NF2010255 (PI: Benjamin M. Gyori).
+1. Chan Zuckerberg Initiative (CZI) 2023-329850
+2. DARPA Automating Scientific Knowledge Extraction and Modeling (ASKEM) HR00112220036
+3. DARPA Young Faculty Award W911NF2010255 (PI: Benjamin M. Gyori).