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adjust test running against cwltool.Dockerfile
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mr-c committed Oct 20, 2021
1 parent d4768ae commit 30800a2
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2 changes: 1 addition & 1 deletion build-cwltool-docker.sh
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ docker run -it -v /var/run/docker.sock:/var/run/docker.sock \
-v /tmp:/tmp \
-v "$PWD":/tmp/cwltool \
quay.io/commonwl/cwltool_module /bin/sh -c \
"apk add gcc bash && pip install -r/tmp/cwltool/test-requirements.txt ; pytest -k 'not test_bioconda and not test_double_overwrite and not test_env_filtering' -n auto -v -rs --pyargs cwltool"
"apk add gcc bash && pip install -r/tmp/cwltool/test-requirements.txt ; pytest -k 'not (test_bioconda or test_double_overwrite or test_env_filtering or test_biocontainers or test_disable_file_overwrite_without_ext or test_disable_file_creation_in_outdir_with_ext or test_write_write_conflict or test_directory_literal_with_real_inputs_inside or test_revsort_workflow)' --ignore-glob '*test_udocker.py' -n auto -v -rs --pyargs cwltool"

version=$(git describe --tags)
if echo "$version" | grep -vq '\-' >& /dev/null ; then
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