Updated outputMethod values

[GlassOfWhiskey]

Updated outputMehtod values to last_iteration and all_iterations, according to common-workflow-language/cwl-v1.3#5.

[codecov]

Codecov Report

Attention: Patch coverage is 90.90909% with 1 line in your changes missing coverage. Please review.

Project coverage is 83.78%. Comparing base (4bb5329) to head (b3edc09).

Files with missing lines	Patch %	Lines
cwltool/workflow_job.py	75.00%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main    #2042      +/-   ##
==========================================
- Coverage   83.80%   83.78%   -0.02%     
==========================================
  Files          46       46              
  Lines        8267     8270       +3     
  Branches     2201     2202       +1     
==========================================
+ Hits         6928     6929       +1     
- Misses        858      861       +3     
+ Partials      481      480       -1     

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[mr-c]

make dev cleanup please ☺️