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tests that rely on odgi use odgi files, avoids unnecessary conversions
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susan-garry committed Jul 8, 2024
1 parent ec66a32 commit 62de9fc
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions Makefile
Original file line number Diff line number Diff line change
Expand Up @@ -27,10 +27,10 @@ test-flatgfa: fetch-og

turnt -e flatgfa_mem -e flatgfa_file -e flatgfa_file_inplace tests/*.gfa

-turnt --save -v -e chop_oracle_fgfa tests/*.gfa
-turnt --save -v -e chop_oracle_fgfa tests/*.og
turnt -v --diff -e flatgfa_chop tests/*.gfa

-turnt --save -v -e odgi_depth tests/*.gfa
-turnt --save -v -e odgi_depth tests/*.og
turnt -v --diff -e flatgfa_depth tests/*.gfa

clean:
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