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fixed a little typo in bamCompare #967

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merged 2 commits into from
Jul 23, 2020
Merged

fixed a little typo in bamCompare #967

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4c7ed7f
fixed a little typo in bamCompare
Jul 9, 2020
7e5d9ab
Merge remote-tracking branch 'origin/develop' into bamCompare_bugfix
Jul 23, 2020
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2 changes: 1 addition & 1 deletion deeptools/bamCompare.py
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Original file line number Diff line number Diff line change
Expand Up @@ -254,7 +254,7 @@ def main(args=None):
if args.normalizeUsing == 'None':
args.normalizeUsing = None # For the sake of sanity
if args.scaleFactorsMethod != 'None' and args.normalizeUsing:
sys.exit("`--normalizeUsing {}` is only valid if you also use `--scaleFactorMethod None`! To prevent erroneous output, I will quit now.\n".format(args.normalizeUsing))
sys.exit("`--normalizeUsing {}` is only valid if you also use `--scaleFactorsMethod None`! To prevent erroneous output, I will quit now.\n".format(args.normalizeUsing))

# Get mapping statistics
bam1, mapped1, unmapped1, stats1 = bamHandler.openBam(args.bamfile1, returnStats=True, nThreads=args.numberOfProcessors)
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