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Add HarmonicDifferentials #213

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Commits on Nov 16, 2023

  1. Parallelize L2 computations

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    saraedum committed Nov 16, 2023
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  2. Cache cheap but very frequent computations

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    saraedum committed Nov 16, 2023
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Commits on Nov 17, 2023

  1. Break out symbolic expression into a separate module

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    saraedum committed Nov 17, 2023
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Commits on Nov 20, 2023

  1. Make 3,4,13 example work with harmonic differentials 

    admittedly in a hacky way for the time being.
    @saraedum
    saraedum committed Nov 20, 2023
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  2. Work around random output in doctests

    @saraedum
    saraedum committed Nov 20, 2023
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  3. Fix evaluation of harmonic differentials

    @saraedum
    saraedum committed Nov 20, 2023
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  4. Fix doctest output of root_branch

    @saraedum
    saraedum committed Nov 20, 2023
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  5. Adapt doctest output to changed printing

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    saraedum committed Nov 20, 2023
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Commits on Nov 21, 2023

  1. Untangle power series constraints from generic symbolic computations … 

    …for differentials
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    saraedum committed Nov 21, 2023
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  2. Fix invocations of HarmonicDifferentials

    @saraedum
    saraedum committed Nov 21, 2023
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  3. Fix invocations of voronoi diagram

    @saraedum
    saraedum committed Nov 21, 2023
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Commits on Nov 28, 2023

  1. Simplify PowerSeriesConstraints interface

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    saraedum committed Nov 28, 2023
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Commits on Dec 1, 2023

  1. Fix doctests

    @saraedum
    saraedum committed Dec 1, 2023
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  2. Fix relation of paths and homology when there is more than one polygon

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    saraedum committed Dec 1, 2023
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Commits on Dec 4, 2023

  1. Drop cohomolyg hack when computing harmonic differentials

    @saraedum
    saraedum committed Dec 4, 2023
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Commits on Dec 12, 2023

  1. Merge remote-tracking branch 'origin/master' into deformation

    @saraedum
    saraedum committed Dec 12, 2023
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  2. Fix output of intersection number 

    checked manually that the original value was wrong
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    saraedum committed Dec 12, 2023
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  3. Adapt veering triangulation code to changes from deformation

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    saraedum committed Dec 12, 2023
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  4. sage-flatsurf needs bidict now

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    saraedum committed Dec 12, 2023
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Commits on Dec 31, 2023

  1. Fix doctests

    @saraedum
    saraedum committed Dec 31, 2023
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  2. Add relative homology

    @saraedum
    saraedum committed Dec 31, 2023
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Commits on Jan 4, 2024

  1. Add TODO to documentation

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    saraedum committed Jan 4, 2024
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  2. Make standardize_polygons return a morphism

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    saraedum committed Jan 4, 2024
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Commits on Jan 5, 2024

  1. Fix typo

    @saraedum
    saraedum committed Jan 5, 2024
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  2. Make canonicalize() produce a morphism

    @saraedum
    saraedum committed Jan 5, 2024
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  3. Fix caching of cohomology

    @saraedum
    saraedum committed Jan 5, 2024
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  4. Add some (co)homology TODOs

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    saraedum committed Jan 5, 2024
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Commits on Jan 6, 2024

  1. Use dimension explicitly in cohomology

    @saraedum
    saraedum committed Jan 6, 2024
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  2. Make dimension implicit in homology groups

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    saraedum committed Jan 6, 2024
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Commits on Jan 8, 2024

  1. Rename delaunay module to lazy 

    since it contains surfaces that have nothing to do with Delaunay
triangulations
    @saraedum
    saraedum committed Jan 8, 2024
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  2. Simplify implementation of Euclidean primitives

    @saraedum
    saraedum committed Jan 8, 2024
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  3. Speed up Euclidean geometry

    @saraedum
    saraedum committed Jan 8, 2024
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  4. Remove unused code

    @saraedum
    saraedum committed Jan 8, 2024
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  5. Drop old comment and simplify imports

    @saraedum
    saraedum committed Jan 8, 2024
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  6. Cleanup line_intersection() code

    @saraedum
    saraedum committed Jan 8, 2024
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  7. Make euclidean geometry assume that inputs are vectors

    @saraedum
    saraedum committed Jan 8, 2024
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  8. Fix deprecation warnings in erase_marked_points()

    @saraedum
    saraedum committed Jan 8, 2024
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Commits on Jan 9, 2024

  1. Fix relative homology 

    The n-cycles C_n(X, A) are given by C_n(X)/C_n(A) not C_n(X/A).
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    saraedum committed Jan 9, 2024
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  2. Fix TODOs 

    by postponing them mostly.

Also implement proper checking for coefficient(g)
    @saraedum
    saraedum committed Jan 9, 2024
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  3. Resolve TODO

    @saraedum
    saraedum committed Jan 9, 2024
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  4. Fix code sharing for triangulation

    @saraedum
    saraedum committed Jan 9, 2024
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  5. Drop TODO 

    I forgot what this one was about
    @saraedum
    saraedum committed Jan 9, 2024
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  6. Fix pickling for pyflatsurf surfaces

    @saraedum
    saraedum committed Jan 9, 2024
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  7. Postpone TODO

    @saraedum
    saraedum committed Jan 9, 2024
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  8. Make sure old TODOs are rendered in the documentation

    @saraedum
    saraedum committed Jan 9, 2024
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  9. Fix grammar

    @saraedum
    saraedum committed Jan 9, 2024
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  10. Fix documentation and news

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    saraedum committed Jan 9, 2024
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  11. Fix tracking of morphism/deformation with pyflatsurf

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    saraedum committed Jan 9, 2024
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Commits on Jan 10, 2024

  1. Resolve TODO about cathedral surface

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    saraedum committed Jan 10, 2024
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  2. Cleanup _image_edge of morphisms

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    saraedum committed Jan 10, 2024
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  3. Implement _image_point for triangulation morphisms

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    saraedum committed Jan 10, 2024
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  4. Implement mapping points through erasure of marked points

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    saraedum committed Jan 10, 2024
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  5. Implement and document methods of identity morphisms

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    saraedum committed Jan 10, 2024
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Commits on Jan 11, 2024

  1. Fix category machinery for surface morphisms

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    saraedum committed Jan 11, 2024
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Commits on Jan 12, 2024

  1. Make test suite pass for spaces of morphisms

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    saraedum committed Jan 12, 2024
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  2. Fix printing of surface morphisms

    @saraedum
    saraedum committed Jan 12, 2024
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  3. Allow iterating over all saddle connections

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    saraedum committed Jan 12, 2024
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Commits on Jan 13, 2024

  1. Cleanup handling of sections and add more tests

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    saraedum committed Jan 13, 2024
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Commits on Jan 17, 2024

  1. Cleanup saddle connection computations

    @saraedum
    saraedum committed Jan 17, 2024
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  2. Fix doctest warnings

    @saraedum
    saraedum committed Jan 17, 2024
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  3. Fix mutability of normalized_coordinates()

    @saraedum
    saraedum committed Jan 17, 2024
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  4. Fix is_segment_intersecting

    @saraedum
    saraedum committed Jan 17, 2024
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  5. Fix most pytest tests

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    saraedum committed Jan 17, 2024
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  6. Fix is_segment_intersecting

    @saraedum
    saraedum committed Jan 17, 2024
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  7. Fix typo

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    saraedum committed Jan 17, 2024
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Commits on Jan 18, 2024

  1. Implement and fix saddle connections with non-convex polygonal surfaces

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    saraedum committed Jan 18, 2024
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Commits on Jan 19, 2024

  1. Drop fixed deprecation warning from test

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    saraedum committed Jan 19, 2024
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Commits on Jan 25, 2024

  1. Fix path of mpreal-support header

    @saraedum
    saraedum committed Jan 25, 2024
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  2. Add basis() helper for harmonic differentials

    @saraedum
    saraedum committed Jan 25, 2024
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  3. Merge branch 'deformation' into hodge

    @saraedum
    saraedum committed Jan 25, 2024
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  4. Fix merge errors

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    saraedum committed Jan 25, 2024
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  5. Fix merge errors

    @saraedum
    saraedum committed Jan 25, 2024
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  6. Fix failing doctests

    @saraedum
    saraedum committed Jan 25, 2024
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  7. Fix most doctests

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    saraedum committed Jan 25, 2024
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Commits on Jan 26, 2024

  1. Add symplectic basis for homology groups

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    saraedum committed Jan 26, 2024
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  2. Add period matrix of harmonic differentials

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    saraedum committed Jan 26, 2024
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Commits on Jan 30, 2024

  1. Add generic deformation to orbit closure

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    saraedum committed Jan 30, 2024
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  2. Cache expensive computations in harmonic differentials

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    saraedum committed Jan 30, 2024
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Commits on Jan 31, 2024

  1. Transpose period matrix to be consistent with riemann surfaces in Sag… 

    …eMath
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Commits on Feb 2, 2024

  1. Submit incomplete changes to continue work on harmonic differentials 

    we should probably drop this commit when we continue to work on this.
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  2. Merge branch 'deformation' into hodge

    @saraedum
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  3. Fix typo

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    saraedum committed Feb 2, 2024
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  4. Fix location of polygon after subdivide edges

    @saraedum
    saraedum committed Feb 2, 2024
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  5. Add singularities() method for cone surfaces

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    saraedum committed Feb 2, 2024
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  6. Fix immutability of polygons after subdivide

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    saraedum committed Feb 2, 2024
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  7. Add angle() to points in a surface

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  8. Speed up is_with_boundary()

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  9. Allow algorithm selection when enumerating saddle connections

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  10. Fix pickling of surfaces with lazy labels

    @saraedum
    saraedum committed Feb 2, 2024
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  11. Add a draft of geometric primitives

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  12. Add symplectic basis to homology

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  13. Add more sections to morphisms

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  14. Remove fixed warning

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  15. Add more sections to morphisms

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  16. Add flatsurf saddle connection wrapper

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  17. Fix doctests

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  18. Fix hashing of some surfaces

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    saraedum committed Feb 2, 2024
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  19. Fix doctests

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  20. Fix error message

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  21. Fix plotting of surfaces with boundary

    @saraedum
    saraedum committed Feb 2, 2024
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  22. Add TODO

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    saraedum committed Feb 2, 2024
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  23. Fix doctests

    @saraedum
    saraedum committed Feb 2, 2024
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  24. Make conversion from and to exact real with pyflatsurf work again

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    saraedum committed Feb 2, 2024
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Commits on Feb 4, 2024

  1. Implement conversion from AA to pyflatsurf

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Commits on Feb 9, 2024

  1. Add a draft of Euclidean geometry ressembling our hyperbolic geometry

    @saraedum
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  2. Cleanup hyperbolic geometry

    @saraedum
    saraedum committed Feb 9, 2024
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  3. Fix circle_from_three_points

    @saraedum
    saraedum committed Feb 9, 2024
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  4. Merge circle copyright into euclidean copyright

    @saraedum
    saraedum committed Feb 9, 2024
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  5. Fix doctests

    @saraedum
    saraedum committed Feb 9, 2024
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  6. Merge branch 'deformation' into hodge

    @saraedum
    saraedum committed Feb 9, 2024
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  7. Fix doctests

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  8. Fix doctests

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  9. Fix doctests

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  10. Merge branch 'deformation' into hodge

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Commits on Feb 10, 2024

  1. Hide more of the pyflatsurf surface interface in GL2ROrbitClosure

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Commits on Feb 11, 2024

  1. Simplify pyflatsurf conversion code

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  2. Make FlowComponents objects in sage-flatsurf

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Commits on Feb 13, 2024

  1. Add TODO

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  2. Generalize subdivisions

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  3. Merge branch 'deformation' into hodge

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  4. Fix radius of convergence computations for Voronoi cells

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Commits on Feb 19, 2024

  1. Add error computations

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  2. Generalize insertion of marked points

    @saraedum
    saraedum committed Feb 19, 2024
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  3. Merge branch 'deformation' into hodge

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Commits on Feb 21, 2024

  1. A draft of generalized Voronoi cells

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  2. Fix multiplication of identity morphisms

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    saraedum committed Feb 21, 2024
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  3. Simplify equality of the unknown surface

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Commits on Feb 27, 2024

  1. Add more generalized Voronoi bits

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  2. Revert "Add more generalized Voronoi bits" 

    This reverts commit 2ee91ce.
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  3. Revert "A draft of generalized Voronoi cells" 

    This reverts commit b3d1d48.
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  4. Only allow Voronoi cells around vertices

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  5. A draft of cheaper Apollonius disks

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Commits on Feb 28, 2024

  1. Revert "A draft of cheaper Apollonius disks" 

    This reverts commit c748001.
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  2. Fix equality checks for half spaces

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    saraedum committed Feb 28, 2024
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  3. Add a more involved harmonic differential example

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  4. Replace ncoefficients with explicit error bounds

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  5. Fix classical Voronoi cell computations

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Commits on Mar 4, 2024

  1. Simplify and generalize Voronoi cell machinery

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  2. Fix doctests

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    saraedum committed Mar 4, 2024
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  3. Add some TODOs for surface plotting

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    saraedum committed Mar 4, 2024
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Commits on Mar 5, 2024

  1. Add a generic isometry morphism to implement rotations and such

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  2. Add mapping of cohomology classes through isomorphisms

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  3. Map harmonic differentials through morphisms

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Commits on Mar 8, 2024

  1. A first version of functional non-Voronoi cells

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  2. A first draft of a cleaner setup for cell decompositions

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    saraedum committed Mar 8, 2024
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Commits on Mar 10, 2024

  1. Make approximate Voronoi cells work

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    saraedum committed Mar 10, 2024
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  2. Speed up cell computations

    @saraedum
    saraedum committed Mar 10, 2024
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  3. Fix bug in roots containment of surfaces

    @saraedum
    saraedum committed Mar 10, 2024
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  4. Improve layouting of finite type surfaces

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    saraedum committed Mar 10, 2024
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  5. Adapt harmonic differentials to cell constructions

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    saraedum committed Mar 10, 2024
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Commits on Mar 11, 2024

  1. Better error reporting for harmonic differentials

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    saraedum committed Mar 11, 2024
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Commits on Mar 12, 2024

  1. Fix corners()

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    saraedum committed Mar 12, 2024
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Commits on Mar 13, 2024

  1. A draft of exporting tangent vectors to simplicial cohomology for fee… 

    …ding them back into harmonic differentials
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Commits on Mar 15, 2024

  1. Add convenience interface to relabel()

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    saraedum committed Mar 15, 2024
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  2. Update 3413 example for harmonic differentials

    @saraedum
    saraedum committed Mar 15, 2024
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  3. Speed up graphical surface copying

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    saraedum committed Mar 15, 2024
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Commits on Mar 21, 2024

  1. Compute roots of differentials

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    saraedum committed Mar 21, 2024
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Commits on Mar 27, 2024

  1. Implement normalization of linear system to bring down condition when… 

    … solving for harmonic differentials (a bit)
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  2. Cache L2 consistency for various cohomology classes

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    saraedum committed Mar 27, 2024
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  3. Speed up surface layouting algorithm

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    saraedum committed Mar 27, 2024
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  4. Speed up is_segment_intersecting() with bounding box computations

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    saraedum committed Mar 27, 2024
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Commits on Mar 28, 2024

  1. Fix box intersection algorithm 

    by not mutating the input boxes
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    saraedum committed Mar 28, 2024
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  2. Speed up plotting

    @saraedum
    saraedum committed Mar 28, 2024
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  3. Speed up plotting by computing vertex locations on demand

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    saraedum committed Mar 28, 2024
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  4. Add methods to show how points in a surface cluster

    @saraedum
    saraedum committed Mar 28, 2024
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  5. Improve differential caching and reporting of L2 errors

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    saraedum committed Mar 28, 2024
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Commits on Mar 29, 2024

  1. Implement clustering of roots

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    saraedum committed Mar 29, 2024
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  2. Add explicit forcing of zeros at singularities

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    saraedum committed Mar 29, 2024
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  3. Fix forcing of zeros near singularities

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    saraedum committed Mar 29, 2024
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  4. Speed up root branch computations

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    saraedum committed Mar 29, 2024
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  5. Export L2 explicitly in differential

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    saraedum committed Mar 29, 2024
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  6. Speed up radius of convergence computations when repeated

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    saraedum committed Mar 29, 2024
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  7. Enable denormalization again and fix formula for scaling factor 

    the power series at the singularities are defined on a different chart.
We need to scale the factor since our radius computation comes from a
chart after taking an n-th power.
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  8. Make prescribed singularities configurable

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    saraedum committed Mar 29, 2024
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  9. Speed up differential computations

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    saraedum committed Mar 29, 2024
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Commits on Mar 31, 2024

  1. Improve condition of harmonic differential system by using inradius

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    saraedum committed Mar 31, 2024
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  2. Fix doctest output

    @saraedum
    saraedum committed Mar 31, 2024
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  3. Make it easier to show zero flags when plotting

    @saraedum
    saraedum committed Mar 31, 2024
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  4. Bring adjaciencies=[] feature back

    @saraedum
    saraedum committed Mar 31, 2024
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  5. Remove temporary asserts again

    @saraedum
    saraedum committed Mar 31, 2024
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  6. Update doctest 

    the choice of polygon layout has changed so the outputs changed
accordingly.
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Commits on Apr 3, 2024

  1. Fix distance computations

    @saraedum
    saraedum committed Apr 3, 2024
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  2. Fix typo in error message

    @saraedum
    saraedum committed Apr 3, 2024
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  3. Silence verbose error output a bit

    @saraedum
    saraedum committed Apr 3, 2024
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  4. Towards better coefficient counts for harmonic differentials 

    currently, the documentation does not really make sense here. We're
still hunting for a good definition of "error" that we can optimize for,
compute, and that makes some mathematical sense.
    @saraedum
    saraedum committed Apr 3, 2024
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Commits on Apr 6, 2024

  1. Run expensive import only once

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    saraedum committed Apr 6, 2024
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  2. Disable (likely) broken plotting code

    @saraedum
    saraedum committed Apr 6, 2024
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  3. Use CDF/RDF for speed

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    saraedum committed Apr 6, 2024
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Commits on Apr 7, 2024

  1. Faster computation by more aggressive caching of roots of unity

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  2. Faster iszero for power series

    @saraedum
    saraedum committed Apr 7, 2024
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  3. Minor speedups

    @saraedum
    saraedum committed Apr 7, 2024
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Commits on Apr 16, 2024

  1. Fix Delaunay triangulation

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    saraedum committed Apr 16, 2024
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Commits on Apr 22, 2024

  1. Make mapped voronoi decompositions mostly functional

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    saraedum committed Apr 22, 2024
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Commits on Apr 23, 2024

  1. Drop unused code

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    saraedum committed Apr 23, 2024
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  2. Fix printing of mapped cells

    @saraedum
    saraedum committed Apr 23, 2024
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Commits on Apr 24, 2024

  1. Normalize differential in example

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    saraedum committed Apr 24, 2024
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Commits on May 3, 2024

  1. Initial version of a 3-4-13 overview which should be added to example… 

    …s/ eventually
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    saraedum committed May 3, 2024
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Commits on May 6, 2024

  1. Fix root finding of rational functions and implement generic preimage… 

    … code
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Commits on May 7, 2024

  1. Improve monodromy computations

    @saraedum
    saraedum committed May 7, 2024
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  2. Fix root clustering computations

    @saraedum
    saraedum committed May 7, 2024
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Commits on May 8, 2024

  1. Modify monodromy a bit 

    this does not help much with actual monodromy computations.
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Commits on May 9, 2024

  1. Towards degree and ramification computations and controlling duplicat… 

    …e preimages
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Commits on May 11, 2024

  1. Implement deduplication of preimages of rational maps

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    saraedum committed May 11, 2024
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Commits on May 12, 2024

  1. Make basic ramification point detection work

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    saraedum committed May 12, 2024
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Commits on May 14, 2024

  1. Fix monodromy plots

    @saraedum
    saraedum committed May 14, 2024
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  2. Some minor patches to improve monodromy

    @saraedum
    saraedum committed May 14, 2024
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Commits on May 16, 2024

  1. Do not abort monodromy plots when there is a problem with the data

    @saraedum
    saraedum committed May 16, 2024
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  2. Black format source code

    @saraedum
    saraedum committed May 16, 2024
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  3. Merge remote-tracking branch 'origin/master' into hodge

    @saraedum
    saraedum committed May 16, 2024
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Commits on May 28, 2024

  1. Describe an algorithm to determine ncoefficients()

    @saraedum
    saraedum committed May 28, 2024
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  2. Add TODO

    @saraedum
    saraedum committed May 28, 2024
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Commits on Jun 9, 2024

  1. Fix memory leak in computing L2 consistencies

    @saraedum
    saraedum committed Jun 9, 2024
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  2. Roots may not be exactly zero

    @saraedum
    saraedum committed Jun 9, 2024
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  3. Use same default value everywhere

    @saraedum
    saraedum committed Jun 9, 2024
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  4. Improve monodromy videos

    @saraedum
    saraedum committed Jun 9, 2024
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  5. Fix ncoefficients

    @saraedum
    saraedum committed Jun 9, 2024
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  6. Speed up error plotting

    @saraedum
    saraedum committed Jun 9, 2024
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  7. Speed up Voronoi machinery

    @saraedum
    saraedum committed Jun 9, 2024
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  8. Speed up some vector constructions

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    saraedum committed Jun 9, 2024
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  9. Add monodromy group calculation

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    saraedum committed Jun 9, 2024
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Commits on Jun 10, 2024

  1. Fix ordering in parallel monodromy computation

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    saraedum committed Jun 10, 2024
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Commits on Jun 11, 2024

  1. Allow more recent exactreal

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    saraedum committed Jun 11, 2024
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Commits on Jun 12, 2024

  1. Merge remote-tracking branch 'origin/master' into hodge

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    saraedum committed Jun 12, 2024
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Commits on Jun 13, 2024

  1. Merge remote-tracking branch 'origin/master' into hodge

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    saraedum committed Jun 13, 2024
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Commits on Jul 2, 2024

  1. Merge branch 'cache' into hodge

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    saraedum committed Jul 2, 2024
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  2. Fix cached methods

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    saraedum committed Jul 2, 2024
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Commits on Jul 4, 2024

  1. Bring back radius_of_convergence() that was deleted accidentally

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    saraedum committed Jul 4, 2024
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  2. Merge branch 'cache' into hodge

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    saraedum committed Jul 4, 2024
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  3. Improve printing of cache and features in TOC

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    saraedum committed Jul 4, 2024
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  4. Merge remote-tracking branch 'origin/master' into hodge

    @saraedum
    saraedum committed Jul 4, 2024
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  5. Fix typo

    @saraedum
    saraedum committed Jul 4, 2024
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Commits on Jul 8, 2024

  1. Merge remote-tracking branch 'origin/master' into hodge

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    saraedum committed Jul 8, 2024
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Commits on Aug 9, 2024

  1. Merge remote-tracking branch 'origin/master' into deformation

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    saraedum committed Aug 9, 2024
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  2. Black format source code

    @saraedum
    saraedum committed Aug 9, 2024
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  3. Drop duplicate homology() and cohomology()

    @saraedum
    saraedum committed Aug 9, 2024
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Commits on Aug 25, 2024

  1. Black format source code

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    saraedum committed Aug 25, 2024
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Commits on Aug 26, 2024

  1. Merge branch 'veech-on-homology' into deformation

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    saraedum committed Aug 26, 2024
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  2. Merge branch 'deformation' into hodge

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    saraedum committed Aug 26, 2024
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  3. Merge branch 'master' into deformation

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    saraedum committed Aug 26, 2024
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  4. Merge branch 'master' into hodge

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    saraedum committed Aug 26, 2024
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  5. Merge branch 'delaunay-decompose' into deformation

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    saraedum committed Aug 26, 2024
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  6. Merge branch 'deformation' into hodge

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    saraedum committed Aug 26, 2024
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  7. Only cache for immutable surfaces

    @saraedum
    saraedum committed Aug 26, 2024
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  8. Fix merge from deformation

    @saraedum
    saraedum committed Aug 26, 2024
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  9. Fix calls to delaunay_triangulate

    @saraedum
    saraedum committed Aug 26, 2024
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  10. Implement some eq and hash

    @saraedum
    saraedum committed Aug 26, 2024
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  11. Simplify doctests

    @saraedum
    saraedum committed Aug 26, 2024
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  12. Fix warning

    @saraedum
    saraedum committed Aug 26, 2024
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  13. Allow mapping of line segments 

    this should be wrapped like we did with homology eventaully.
    @saraedum
    saraedum committed Aug 26, 2024
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  14. Merge remote-tracking branch 'origin/master' into hodge

    @saraedum
    saraedum committed Aug 26, 2024
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