Implementations of randomization and generative null models for network neuroscience, in Python, MATLAB and R.
The "live" version of Supplementary Table 1 in Null models in network neuroscience by František Váša & Bratislav Mišić.
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brainconn (https://github.com/fiuneuro/brainconn)
- NeuroMaps (https://netneurolab.github.io/neuromaps/)
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BrainSMASH (https://github.com/murraylab/brainsmash)
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BrainSpace (https://brainspace.readthedocs.io)
- pyunicorn (https://github.com/pik-copan/pyunicorn)
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spatiotemporal (https://github.com/mwshinn/spatiotemporal)
- neofunkatron (https://github.com/neofunkatron/neofunkatron)
- spatiotemporal (https://github.com/mwshinn/spatiotemporal)
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GRETNA (GUI) (https://nitrc.org/projects/gretna)
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rotate_parcellation (https://github.com/frantisekvasa/rotate_parcellation)
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spin-test (vertices) (https://github.com/spin-test/spin-test)
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BrainSpace (https://brainspace.readthedocs.io)
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Measures of Analysis of Time Series toolkit (https://mathworks.com/matlabcentral/fileexchange/27561)
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LancsBioMed (https://github.com/PhysLancIT/LancsBioMed)
- Surrogate Graph Signals (https://miplab.epfl.ch/index.php/software/graph-surrogates)
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generative_models (https://github.com/brain-networks/generative_models)
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generativenetworkmodel (https://github.com/DanAkarca/generativenetworkmodel)
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brainGraph (https://github.com/cwatson/brainGraph)
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evalClust (https://github.com/GatesLab/evalClust)
- rotate_parcellation (https://github.com/frantisekvasa/rotate_parcellation)
- nonlinearTseries (https://github.com/constantino-garcia/nonlinearTseries)
- evalClust (https://github.com/GatesLab/evalClust)