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Move VEP to Requester Pays #8268

Merged
merged 15 commits into from
Mar 9, 2020
Merged

Move VEP to Requester Pays #8268

merged 15 commits into from
Mar 9, 2020

Commits on Mar 6, 2020

  1. WIP

    @johnc1231
    johnc1231 committed Mar 6, 2020
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  2. Hopefully good to use now

    @johnc1231
    johnc1231 committed Mar 6, 2020
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Commits on Mar 7, 2020

  1. No longer usingi vep_data2

    @johnc1231
    johnc1231 committed Mar 7, 2020
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Commits on Mar 8, 2020

  1. GRCh37 script seems to work now

    @johnc1231
    johnc1231 committed Mar 8, 2020
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Commits on Mar 9, 2020

  1. Seems like both work now, time to test

    @johnc1231
    johnc1231 committed Mar 9, 2020
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  2. Removed old rm

    @johnc1231
    johnc1231 committed Mar 9, 2020
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  3. Specify the project in gsutil commands

    @johnc1231
    johnc1231 committed Mar 9, 2020
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  4. Ensure they're specifically allowing hail-us-vep

    @johnc1231
    johnc1231 committed Mar 9, 2020
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  5. Renamed cluster-vep-check.py to indicate it is only for GRCh37

    @johnc1231
    johnc1231 committed Mar 9, 2020
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  6. Get the json file from hail-us-vep

    @johnc1231
    johnc1231 committed Mar 9, 2020
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  7. Changed gold standard files to use hail-us-vep

    @johnc1231
    johnc1231 committed Mar 9, 2020
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  8. Separately testing GRCh38

    @johnc1231
    johnc1231 committed Mar 9, 2020
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  9. Warnings about outside of US

    @johnc1231
    johnc1231 committed Mar 9, 2020
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  10. Addressed

    @johnc1231
    johnc1231 committed Mar 9, 2020
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  11. US clarification

    @johnc1231
    johnc1231 committed Mar 9, 2020
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