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pwas_cancer

scripts and files used for this paper

topmed-interval_scripts: all scripts I used for running and filtering/formatting TOPMed-MESA. S-PrediXcan is part of the MetaXcan package https://github.com/hakyimlab/MetaXcan.

aric_scripts: all scripts I used for running and filtering/formatting ARIC. Pipeline referenced from the Chatterjee lab http://nilanjanchatterjeelab.org/pwas/, which is based on TWAS/FUSION from the Gusev lab http://gusevlab.org/projects/fusion/.

meta_analysis_scripts: all scripts I used for running METAL and filtering/formatting results.

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