DNA-Sequence-Classifier

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About The Project

DNA, abbreviation of deoxyribonucleic acid, organic chemical of complex molecular structure that is found in all prokaryotic and eukaryotic cells and in many viruses. DNA codes genetic information for the transmission of inherited traits. Every species has a specific genes encoded in their DNA.

In this project, I have designed and developed a machine learning model for DNA sequence classification based on spectral sequence representation.

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Libraries used :

  * keras
  * Tensorflow
  * sklearn
  * pandas
  * numpy
  

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Algorithms Used

• VGG16 (Transfer Learning in Deep Learning)

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Directory Structure

├── DNA Sequencing and applying Classifier.ipynb
├── dna_sequencing_and_applying_classifier.py
├── dog_data.txt
├── human_data.txt
├── LICENSE
├── README.md
└── requirements.txt

Getting Started

This is an example of how you may set up your project locally. To get a local copy up and running follow these simple steps.

Prerequisites

Create a virtualenv. (optional)

python3 -m venv DNA-Clf
source DNA-Clf/bin/activate

Installation

1. Clone the repo

   git clone https://github.com/kanishksh4rma/DNA-Sequence-Classifier.git

2. Install required libraries

   pip install -r requirements.txt

Usage

Now run the app.py file by typing following command

   python app.py

For more examples, please refer to the Documentation

About Contribution :

• Raise the issue .
• Work on raised issues .
• Come up with interesting Medical related problems and solutions .
• You can improve the UI/UX .
• Can contribute on readme files as well .

Package Guidelines

See CONTRIBUTING.md file for detailed information.

License

See LICENSE file.

                                  "Take stands, take risks, take responsibility."
                                                                — Muriel Siebert

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