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The previous generation of bioinformatics frameworks, eg. nextflow, Snakemake, WDL, etc., are difficult to develop with, use outdated languages, and lack features needed in a modern software framework.
The LatchBio SDK is a workflow description language built with an emphasis on developer ergonomics and the following mission-critical features:
- No-code interface generation and hosting
- Strong typing of parameters
- Serverless cloud deployments
- Baked-in versioning + containerization
- Auditable data + execution lineage
- First-class python support (with integration for arbitrary languages)
Latch Verified is a set of curated bioinformatics workflows built using the SDK. Check out source code and documentation at the linked repository.
- How the SDK fits into a broader BioDevelopment Framework
- An overview of the motivations and features of the SDK
- SDK source code