Fix documentation build/deployment Action (#335)

.github/workflows/deploy_documentation.yml

@@ -71,6 +71,6 @@ jobs:
       run: |
         mkdir docs
         touch docs/.nojekyll
-        cp -r src/docs/* docs/
-        poetry run gen-doc -d docs src/sssom_schema/schema/sssom_schema.yaml --template-directory src/doc-templates
-        poetry run mkdocs gh-deploy
+        make gendoc
+        ([ ! -f docs/about.md ] && cp src/docs/about.md docs/) || true
+        make mkd-gh-deploy

Makefile

@@ -47,10 +47,14 @@ deploy: all mkd-gh-deploy
 
 # generates all project files
 gen-project: $(PYMODEL)
-	$(RUN) gen-project -d $(DEST) $(SOURCE_SCHEMA_PATH) && mv $(DEST)/*.py $(PYMODEL)
+	$(RUN) gen-project \
+		--exclude owl \
+		-d $(DEST) $(SOURCE_SCHEMA_PATH) && mv $(DEST)/*.py $(PYMODEL)
 
 test:
-	$(RUN) gen-project -d tmp $(SOURCE_SCHEMA_PATH) 
+	$(RUN) gen-project \
+		--exclude owl \
+		-d tmp $(SOURCE_SCHEMA_PATH) 
 
 check-config:
 	@(grep my-datamodel about.yaml > /dev/null && printf "\n**Project not configured**:\n\n  - Remember to edit 'about.yaml'\n\n" || exit 0)