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makePairs as an entry point
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WardDeb committed Aug 1, 2024
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41 changes: 41 additions & 0 deletions pyproject.toml
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[build-system]
requires = ["setuptools >= 61.0", "setuptools_scm>=8"]
build-backend = "setuptools.build_meta"

[project]
name = "snakePipes"
description = 'Snakemake workflows and wrappers for NGS data processing from the MPI-IE'
readme = "README.rst"
version = "3.9.1"
keywords = [
"DNA-mapping",
"ChIP-Seq",
"mRNA-seq",
"noncoding-RNA-seq",
"ATAC-seq",
"scRNA-seq",
"WGBS / Bisulfite seq",
"epigenetics workflows",
"Illumina"
]
authors = [
{name = "Bioinfo-Core MPI-IE"}
]
requires-python = ">=3.9"
dependencies = [
"snakemake >= 6.2.1, <7.19.0",
"psutil",
"pandas",
"thefuzz",
"pyyaml >= 5.1",
"tabulate < 0.9"
]
classifiers = [
"Intended Audience :: Bioinformaticians",
"Intended Audience :: Biologists",
"License :: OSI Approved :: MIT License",
"Programming Language :: Python :: 3",
]

[project.scripts]
makePairs = "snakePipes.workflows.makePairs.makePairs:main"
6 changes: 0 additions & 6 deletions requirements.txt

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28 changes: 0 additions & 28 deletions setup.py

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2 changes: 2 additions & 0 deletions snakePipes/workflows/makePairs/makePairs.py
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def main():
print("Bonjour from makePairs ! ")

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