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use max_depth calculated by owlapi_wrapper for UMLS ontologies #182

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merged 1 commit into from
Jan 30, 2024

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@alexskr alexskr commented Jan 30, 2024

Get max depth from the metrics.csv file which is already generated by owlapi_wrapper when new submission of UMLS ontology is created. Ruby code/sparql for calculating max_depth fails for large UMLS ontologie with AllegroGraph backend

Addresses #181

Get max depth from the metrics.csv file which is already generated
by owlapi_wrapper when new submission of UMLS ontology is created.
Ruby code/sparql for calculating max_depth fails for large UMLS
ontologie with AllegroGraph backend

Addresses #181
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codecov bot commented Jan 30, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Comparison is base (ec25d0e) 80.76% compared to head (bee7779) 80.04%.

Additional details and impacted files
@@             Coverage Diff             @@
##           develop     #182      +/-   ##
===========================================
- Coverage    80.76%   80.04%   -0.72%     
===========================================
  Files           63       63              
  Lines         4917     4917              
===========================================
- Hits          3971     3936      -35     
- Misses         946      981      +35     
Flag Coverage Δ
unittests 80.04% <100.00%> (-0.72%) ⬇️

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alexskr commented Jan 30, 2024

code coverage went down for lib/ontologies_linked_data/metrics/metrics.rb because ruby/sparql code is no longer used for calculating metrics. That code should be removed eventually.

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