Fixed erroneous typing of RO_0002222 and BFO_0000063 as APs

and removed subAP assertion connecting them. Not clear where this came from.
oborel · May 11, 2017 · 4696eb5 · 4696eb5
1 parent 70aa279
commit 4696eb5
Showing 1 changed file with 20 additions and 29 deletions.
diff --git a/src/ontology/ro-edit.owl b/src/ontology/ro-edit.owl
@@ -26,8 +26,8 @@
         <owl:imports rdf:resource="http://purl.obolibrary.org/obo/ro/go-biotic.owl"/>
         <owl:imports rdf:resource="http://purl.obolibrary.org/obo/ro/el-constraints.owl"/>
         <dc:description xml:lang="en">The OBO Relations Ontology (RO) is a collection of OWL relations (ObjectProperties) intended for use across a wide variety of biological ontologies.</dc:description>
-        <foaf:homepage rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI"> https://github.com/oborel/obo-relations/</foaf:homepage>
         <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Includes Ontology(OntologyID(Anonymous-21)) [Axioms: 26 Logical Axioms: 0]</rdfs:comment>
+        <foaf:homepage rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI"> https://github.com/oborel/obo-relations/</foaf:homepage>
         <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Includes Ontology(OntologyID(Anonymous-21)) [Axioms: 32 Logical Axioms: 0]</rdfs:comment>
         <dc:source rdf:resource="http://obofoundry.org/ro"/>
         <dc:title xml:lang="en">OBO Relations Ontology</dc:title>
@@ -46,14 +46,6 @@
 
 
 
-    <!-- http://purl.obolibrary.org/obo/BFO_0000063 -->
-
-    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000063">
-        <rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0002222"/>
-    </owl:AnnotationProperty>
-
-
-
     <!-- http://purl.obolibrary.org/obo/IAO_0000232 -->
 
     <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000232"/>
@@ -168,17 +160,6 @@
 
 
 
-    <!-- http://purl.obolibrary.org/obo/RO_0002222 -->
-
-    <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002222">
-        <obo:IAO_0000117>Chris Mungall</obo:IAO_0000117>
-        <obo:IAO_0000232>Do not use this relation directly. It is ended as a grouping for relations between occurrents involving the relative timing of their starts and ends.</obo:IAO_0000232>
-        <dc:source rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://docs.google.com/document/d/1kBv1ep_9g3sTR-SD3jqzFqhuwo9TPNF-l-9fUDbO6rM/edit?pli=1</dc:source>
-        <oboInOwl:inSubset rdf:resource="http://purl.obolibrary.org/obo/ro/subsets#ro-eco"/>
-    </owl:AnnotationProperty>
-
-
-
     <!-- http://purl.obolibrary.org/obo/RO_0002259 -->
 
     <owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002259">
@@ -746,6 +727,7 @@ Where we have an annotation assertion
     <!-- http://purl.obolibrary.org/obo/BFO_0000063 -->
 
     <rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000063">
+        <rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0002222"/>
         <owl:propertyChainAxiom rdf:parseType="Collection">
             <rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000050"/>
             <rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000063"/>
@@ -754,6 +736,7 @@ Where we have an annotation assertion
             <rdf:Description rdf:about="http://purl.obolibrary.org/obo/RO_0002092"/>
             <rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000063"/>
         </owl:propertyChainAxiom>
+        <oboInOwl:inSubset rdf:resource="http://purl.obolibrary.org/obo/ro/subsets#ro-eco"/>
     </rdf:Description>
 
 
@@ -2539,6 +2522,17 @@ Expands_to: T has_fasciculating_neuron_projection that synapse_in some R.</obo:I
 
 
 
+    <!-- http://purl.obolibrary.org/obo/RO_0002222 -->
+
+    <owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002222">
+        <obo:IAO_0000117>Chris Mungall</obo:IAO_0000117>
+        <obo:IAO_0000232>Do not use this relation directly. It is ended as a grouping for relations between occurrents involving the relative timing of their starts and ends.</obo:IAO_0000232>
+        <dc:source rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://docs.google.com/document/d/1kBv1ep_9g3sTR-SD3jqzFqhuwo9TPNF-l-9fUDbO6rM/edit?pli=1</dc:source>
+        <oboInOwl:inSubset rdf:resource="http://purl.obolibrary.org/obo/ro/subsets#ro-eco"/>
+    </owl:ObjectProperty>
+
+
+
     <!-- http://purl.obolibrary.org/obo/RO_0002223 -->
 
     <rdf:Description rdf:about="http://purl.obolibrary.org/obo/RO_0002223">
@@ -7401,9 +7395,6 @@ Environments include natural environments or exposures, experimentally applied c
     ///////////////////////////////////////////////////////////////////////////////////////
      -->
 
-    <rdf:Description rdf:about="http://purl.obolibrary.org/obo/BFO_0000063">
-        <oboInOwl:inSubset rdf:resource="http://purl.obolibrary.org/obo/ro/subsets#ro-eco"/>
-    </rdf:Description>
     <rdf:Description rdf:about="http://purl.obolibrary.org/obo/IAO_0000078">
         <obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
         <rdfs:label xml:lang="en">curation status specification</rdfs:label>
@@ -7629,9 +7620,9 @@ Environments include natural environments or exposures, experimentally applied c
                 <rdf:first>
                     <rdf:Description>
                         <rdf:type rdf:resource="http://www.w3.org/2003/11/swrl#IndividualPropertyAtom"/>
-                        <swrl:propertyPredicate rdf:resource="http://purl.obolibrary.org/obo/RO_0002213"/>
-                        <swrl:argument1 rdf:resource="urn:swrl#x"/>
-                        <swrl:argument2 rdf:resource="urn:swrl#y"/>
+                        <swrl:propertyPredicate rdf:resource="http://purl.obolibrary.org/obo/RO_0002212"/>
+                        <swrl:argument1 rdf:resource="urn:swrl#y"/>
+                        <swrl:argument2 rdf:resource="urn:swrl#z"/>
                     </rdf:Description>
                 </rdf:first>
                 <rdf:rest>
@@ -7640,9 +7631,9 @@ Environments include natural environments or exposures, experimentally applied c
                         <rdf:first>
                             <rdf:Description>
                                 <rdf:type rdf:resource="http://www.w3.org/2003/11/swrl#IndividualPropertyAtom"/>
-                                <swrl:propertyPredicate rdf:resource="http://purl.obolibrary.org/obo/RO_0002212"/>
-                                <swrl:argument1 rdf:resource="urn:swrl#y"/>
-                                <swrl:argument2 rdf:resource="urn:swrl#z"/>
+                                <swrl:propertyPredicate rdf:resource="http://purl.obolibrary.org/obo/RO_0002213"/>
+                                <swrl:argument1 rdf:resource="urn:swrl#x"/>
+                                <swrl:argument2 rdf:resource="urn:swrl#y"/>
                             </rdf:Description>
                         </rdf:first>
                         <rdf:rest rdf:resource="http://www.w3.org/1999/02/22-rdf-syntax-ns#nil"/>