Fix: changes in search, footer, summary and browse pages

app/assets/javascripts/bp_search.js.erb

@@ -159,6 +159,7 @@ jQuery(document).ready(function() {
     jQuery("#search_results a.additional_ont_results_link").live("click", showAdditionalOntResults);
     jQuery("#search_results a.additional_cls_results_link").live("click", showAdditionalClsResults);
 
+    jQuery("#search_options").hide();
     jQuery("#advanced_options").on('click', toggleAdvancedSearchOptions);
 
     // Events to run whenever search results are updated (mainly counts)

app/components/ontology_browse_card_component/ontology_browse_card_component.html.haml

@@ -42,7 +42,7 @@
       - if ontology[:creationDate]
         %span.mr-1
           = render ChipButtonComponent.new(type: "clickable") do
-            %span.mr-1 Uploaded
+            %span.mr-1 Submitted
             %span.browse-uploaded-date{data:{controller: 'timeago', 'timeago-datetime-value': ontology[:creationDate], 'timeago-add-suffix-value': 'true'}}
             - if ontology[:contact]
               %span.mx-1 by
@@ -51,7 +51,7 @@
 
       - if ontology[:released]
         - date = render DateTimeFieldComponent.new(value: ontology[:released])
-        %span{data:{controller:'tooltip'}, title: "Release date #{date}"}
+        %span{data:{controller:'tooltip'}, title: "Creation date #{date}"}
           = render ChipButtonComponent.new(type: "clickable") do
             = DateTime.parse(date).year rescue date
 

app/controllers/ontologies_controller.rb

@@ -322,7 +322,7 @@ def summary
     @config_properties = properties_hash_values(category_attributes["object description properties"])
     @methodology_properties = properties_hash_values(category_attributes["methodology"])
     @agents_properties = properties_hash_values(category_attributes["persons and organizations"])
-    @dates_properties = properties_hash_values(category_attributes["dates"], custom_labels: {released: "Initially created On"})
+    @dates_properties = properties_hash_values(category_attributes["dates"])
     @links_properties = properties_hash_values(category_attributes["links"])
     @content_properties = properties_hash_values(category_attributes["content"])
     @community_properties = properties_hash_values(category_attributes["community"] + [:notes])

app/helpers/ontologies_helper.rb

@@ -123,8 +123,14 @@ def agent?(sub_metadata, attr)
   end
 
   def display_contact(contacts)
-    contacts.map { |c| "#{c.name.humanize} at #{c.email}" if c.member?(:name) && c.member?(:email) }&.join(", ")
-  end
+    contacts.map do |c|
+      next unless c.member?(:name) && c.member?(:email)
+
+      formatted_name = c[:name].titleize
+      formatted_email = c[:email].downcase
+      "<span class='date_creation_text'>#{formatted_name}</span> (#{formatted_email})"
+    end&.join(" and ")
+  end  
 
   def count_links(ont_acronym, page_name = 'summary', count = 0)
     ont_url = "/ontologies/#{ont_acronym}"

app/views/layouts/_topnav.html.haml

@@ -54,13 +54,10 @@
             - s.item do
               = link_to(t('layout.header.submit_feedback'), feedback_path(location: encode_param(request.url)), id: "submitFeedbackMenuItem", class: "pop_window")
           - d.with_section do |s|
-            - s.header do
-              = t('layout.header.documentation')
             - s.item do
-              = link_to(t('layout.header.help'), "#{$WIKI_HELP_PAGE}", target: "_blank")
+              = link_to(t('layout.header.documentation'), $FOOTER_LINKS[:sections][:support][:documentation] , target: "_blank")
             - s.item do
-              = link_to(t('layout.header.release_notes'), "#{$RELEASE_NOTES}", target: "_blank")
+              = link_to(t('layout.header.cite_us'), $FOOTER_LINKS[:sections][:about][:cite_us], target: "_blank")
             - s.item do
-              = link_to(t('layout.header.publications'), $PUBLICATIONS_URL, target: "_blank")
-
+              = link_to(t('layout.header.release_notes'), $FOOTER_LINKS[:sections][:products][:release_notes], target: "_blank")
 

app/views/ontologies/sections/metadata/_ontology_description_section.html.haml

@@ -25,9 +25,9 @@
           Initial release occurred on
           %span.date_creation_text= l(Date.parse(@submission_latest.released), format: :monthfull_day_year) + '.'
         - if @submission_latest&.contact
-          For additional information, reach out
-          %span.date_creation_text
-            #{display_contact(@submission_latest.contact)}.
+          For additional information, contact
+          %span
+            #{display_contact(@submission_latest.contact).html_safe}.
 
     - unless Array(@submission_latest&.naturalLanguage).empty?
       - l.row do

app/views/submissions/_submissions.html.haml

@@ -18,7 +18,7 @@
         - header.th do
           = attr_label("modificationDate", "Modified", show_tooltip: false)
         - header.th do
-          = attr_label("creationDate", "Uploaded", show_tooltip: false)
+          = attr_label("creationDate", "Submitted", show_tooltip: false)
         - unless @ont_restricted
           - header.th do
             %div.align-middle

config/bioportal_config_env.rb.sample

@@ -248,6 +248,8 @@ $FOOTER_LINKS = {
   }
 }
 
+$NOT_DOWNLOADABLE = {}
+
 $UI_THEME = ENV['UI_THEME'] || 'ontoportal'
 
 $HOSTNAME = ENV['API_URL']