Intrepid2: Initial implementation of team-level getValues #13437

mperego · 2024-09-09T22:19:31Z

@trilinos/intrepid2

Motivation

In most cases, we want to evaluate the reference basis functions at a set of reference points (e.g. quadrature points) that is the same for all the cells in a workset. In this case one evaluates the basis functions at these points on the reference cell, using the getValues function, and then transforms these basis functions to physical cells.
In some cases, however, the evaluation points can be different from cell to cell (e.g., in particle in cell methods, we can have different particles in different cells where we want to evaluate the basis functions). For this use-case, we implement a team-level getValues function, that can be called by the user in a parallel for using a TeamPolicy.

Related Issues

Stakeholder Feedback

Testing

packages/intrepid2/src/Discretization/Basis/Intrepid2_HGRAD_QUAD_Cn_FEMDef.hpp

+      using ScalarType = typename ScalarTraits<typename PointViewType::value_type>::scalar_type;
+      using WorkViewType = Kokkos::DynRankView< ScalarType,typename DT::execution_space::scratch_memory_space,Kokkos::MemoryTraits<Kokkos::Unmanaged> >;
+      ordinal_type sizePerPoint = 3*this->vinv_.extent(0)*get_dimension_scalar(inputPoints);
+      WorkViewType workView(scratchStorage, sizePerPoint*team_member.team_size());


CamelliaDPG · 2024-09-11T16:51:07Z

packages/intrepid2/src/Discretization/Basis/Intrepid2_Basis.hpp

+                                const PointViewType inputPoints,
+                                const EOperator operatorType = OPERATOR_VALUE) const {
+      INTREPID2_TEST_FOR_EXCEPTION_DEVICE_SAFE( true, std::logic_error,
+                                    ">>> ERROR (Basis::getValuesScratchSpace): this method (FEM) is not supported or should be overridden accordingly by derived classes.");


What is the "(FEM)" supposed to convey here? I think the message is clearer without it, but maybe there is something else you wanted to communicate.

packages/intrepid2/src/Discretization/Basis/Intrepid2_HGRAD_LINE_Cn_FEMDef.hpp

+      using ScalarType = typename ScalarTraits<typename PointViewType::value_type>::scalar_type;
+      using WorkViewType = Kokkos::DynRankView< ScalarType,typename DT::execution_space::scratch_memory_space,Kokkos::MemoryTraits<Kokkos::Unmanaged> >;
+      ordinal_type sizePerPoint = this->vinv_.extent(0)*get_dimension_scalar(inputPoints);
+      WorkViewType workView(scratchStorage, sizePerPoint*team_member.team_size());


mperego · 2024-09-26T23:10:27Z

@CamelliaDPG @rppawlo , I encounter this error on CUDA with HCURL_HEX_In basis, test_02, when using dynamic Fad type and enabling Sacado_ENABLE_HIERARCHICAL_DFAD:

14: :0: : block: [3,0,0], thread: [0,0,0] Assertion `Allocation failed.` failed.
14: :0: : block: [3,0,0], thread: [0,3,0] Assertion `Allocation failed.` failed.
14: :0: : block: [3,0,0], thread: [0,1,0] Assertion `Allocation failed.` failed.
14: :0: : block: [0,0,0], thread: [0,1,0] Assertion `Allocation failed.` failed.
14: :0: : block: [0,0,0], thread: [0,2,0] Assertion `Allocation failed.` failed.
14: :0: : block: [0,0,0], thread: [0,3,0] Assertion `Allocation failed.` failed.
14: :0: : block: [0,0,0], thread: [0,0,0] Assertion `Allocation failed.` failed.
14: :0: : block: [2,0,0], thread: [0,0,0] Assertion `Allocation failed.` failed.
14: :0: : block: [2,0,0], thread: [0,1,0] Assertion `Allocation failed.` failed.
14: :0: : block: [2,0,0], thread: [0,2,0] Assertion `Allocation failed.` failed.
14: :0: : block: [2,0,0], thread: [0,3,0] Assertion `Allocation failed.` failed.
14: :0: : block: [1,0,0], thread: [0,1,0] Assertion `Allocation failed.` failed.
14: :0: : block: [1,0,0], thread: [0,2,0] Assertion `Allocation failed.` failed.
14: :0: : block: [1,0,0], thread: [0,3,0] Assertion `Allocation failed.` failed.
14: :0: : block: [1,0,0], thread: [0,0,0] Assertion `Allocation failed.` failed.
14: :0: : block: [4,0,0], thread: [0,1,0] Assertion `Allocation failed.` failed.
14: :0: : block: [4,0,0], thread: [0,2,0] Assertion `Allocation failed.` failed.
14: :0: : block: [4,0,0], thread: [0,3,0] Assertion `Allocation failed.` failed.
14: :0: : block: [4,0,0], thread: [0,0,0] Assertion `Allocation failed.` failed.
14: (ptr->cuda_stream_synchronize_wrapper(stream)) error( cudaErrorAssert): device-side assert triggered /home/mperego/weaver/trilinos/trilinos-repo/packages/kokkos/core/src/Cuda/Kokkos_Cuda_Instance.cpp:166
14: Backtrace:
14: [0x20003600a644] Kokkos::Impl::save_stacktrace()
14: [0x200035fd8598] Kokkos::Impl::host_abort(char const*)
14: [0x200036014b14] Kokkos::Impl::cuda_internal_error_abort(cudaError, char const*, char const*, int)
14: [0x200036016654] Kokkos::Impl::cuda_stream_synchronize(CUstream_st*, Kokkos::Impl::CudaInternal const*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&)
14: [0x2000360166f4] Kokkos::Impl::CudaInternal::fence(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const
14: [0x2000360168bc] Kokkos::Cuda::fence(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&) const
14: [0x100d5b20] 
14: [0x101ebb2c] 
14: [0x1001ee6c] 
14: [0x200036949f5c] 
14: [0x20003694a0f4] __libc_start_main

Any clue of what could be causing it? It does happen only for high-order (order 9), however, I don't think it is a out of memory issue, as the HCURL_TET_In test_02 uses much more scratch memory and it runs fine.

…d tests

trilinos-autotester · 2024-09-27T19:09:12Z

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Pull Request Author: mperego

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Intrepid2: Initial implementation of team-level getValues

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mperego added AT: WIP Causes the PR autotester to not test the PR. (Remove to allow testing to occur.) client: EMPIRE All issues that most directly target the ATDM EMPIRE code labels Sep 9, 2024

mperego self-assigned this Sep 9, 2024

mperego requested a review from a team as a code owner September 9, 2024 22:19

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CamelliaDPG reviewed Sep 11, 2024

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Implemeted team-level getValues for more HGRAD basis. Worked on tests.

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github-advanced-security bot found potential problems Sep 20, 2024

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mperego force-pushed the intrepid2_parallel_getValues branch from 3155976 to 35d70f9 Compare September 20, 2024 22:32

Intrepid2: added tests for HGRAD basis

8d49242

mperego force-pushed the intrepid2_parallel_getValues branch from 35d70f9 to 8d49242 Compare September 21, 2024 01:05

mperego added 7 commits September 25, 2024 08:19

fix comment

e342d58

Intrepid2: Added HCurl team-level getValues and tests

a7fa9b6

Intrepid2: adding test files

54dcd9a

fix

29fba51

fix of fix

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ed10272

mperego added 4 commits September 26, 2024 17:16

Intrepid2: adding some HDIV team-level getValues functions and tests

5e164b6

Intrepid2: Added HDIV and HVOL team-level getValues method and relate…

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…d tests

Intrepid2: Restore changes in some tests

8d85d62

Intrepid2: Adding new files

8728864

mperego removed the AT: WIP Causes the PR autotester to not test the PR. (Remove to allow testing to occur.) label Sep 27, 2024

Intrepid2: Initial implementation of team-level getValues #13437

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Intrepid2: Initial implementation of team-level getValues #13437

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trilinos-autotester commented Sep 27, 2024

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Test Name: PR_gcc-openmpi-openmp

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Test Name: PR_gcc

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Test Name: PR_gcc-openmpi_debug

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Test Name: PR_clang

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Test Name: Trilinos_PR_python3

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Test Name: PR_cuda

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Test Name: PR_intel

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Test Name: PR_cuda-uvm

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trilinos-autotester commented Sep 27, 2024

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Test Name: PR_gcc-openmpi-openmp

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Test Name: PR_gcc

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Test Name: PR_gcc-openmpi_debug

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Test Name: PR_clang

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Test Name: Trilinos_PR_python3

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Test Name: PR_cuda

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Test Name: PR_intel

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Test Name: PR_cuda-uvm

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