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Merge pull request #26 from ts4nfdi/feature/add-tests
Feature: Add integration tests for the search service
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@@ -41,3 +41,5 @@ build/ | |
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| # System files | ||
| .DS_Store | ||
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| /src/frontend/ | ||
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115 changes: 115 additions & 0 deletions
115
src/test/java/org/semantics/apigateway/SearchServiceTest.java
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| package org.semantics.apigateway; | ||
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| import com.google.gson.Gson; | ||
| import com.google.gson.reflect.TypeToken; | ||
| import org.junit.jupiter.api.Test; | ||
| import org.mockito.Mock; | ||
| import org.semantics.apigateway.config.OntologyConfig; | ||
| import org.semantics.apigateway.service.ConfigurationLoader; | ||
| import org.semantics.apigateway.service.search.DynSearchService; | ||
| import org.springframework.beans.factory.annotation.Autowired; | ||
| import org.springframework.boot.test.autoconfigure.web.servlet.AutoConfigureMockMvc; | ||
| import org.springframework.boot.test.context.SpringBootTest; | ||
| import org.springframework.http.ResponseEntity; | ||
| import org.springframework.web.client.RestTemplate; | ||
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| import java.lang.reflect.Type; | ||
| import java.net.URL; | ||
| import java.nio.file.Files; | ||
| import java.nio.file.Paths; | ||
| import java.util.ArrayList; | ||
| import java.util.HashMap; | ||
| import java.util.List; | ||
| import java.util.Map; | ||
| import java.util.concurrent.CompletableFuture; | ||
| import java.util.stream.Collectors; | ||
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| import static org.assertj.core.api.Assertions.assertThat; | ||
| import static org.mockito.ArgumentMatchers.anyString; | ||
| import static org.mockito.ArgumentMatchers.any; | ||
| import static org.mockito.Mockito.when; | ||
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| @AutoConfigureMockMvc | ||
| @SpringBootTest(webEnvironment = SpringBootTest.WebEnvironment.RANDOM_PORT) | ||
| public class SearchServiceTest { | ||
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| @Autowired | ||
| private DynSearchService searchService; | ||
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| @Mock | ||
| private RestTemplate restTemplate; // Mock RestTemplate | ||
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| @Autowired | ||
| private ConfigurationLoader configurationLoader; // Autowire the real ConfigurationLoader | ||
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| @Test | ||
| public void testSearchAllDatabases() { | ||
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| searchService.setRestTemplate(restTemplate); | ||
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| List<OntologyConfig> configs = configurationLoader.getOntologyConfigs(); | ||
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| when(restTemplate.getForEntity( | ||
| anyString(), | ||
| any(Class.class))) | ||
| .thenAnswer(invocation -> { | ||
| String url = invocation.getArgument(0, String.class); | ||
| ResponseEntity<Map<String, Object>> response = ResponseEntity.status(404).body(new HashMap<>()); | ||
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| for (OntologyConfig config : configs) { | ||
| String serviceName = String.format("src/test/resources/mocks/search/%s.json", config.getDatabase()); | ||
| String jsonResponse = new String(Files.readAllBytes(Paths.get(serviceName))); | ||
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| String configHost = new URL(config.getUrl()).getHost(); | ||
| String currentURLHost = new URL(url).getHost(); | ||
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| if (configHost.equals(currentURLHost)) { | ||
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| Gson gson = new Gson(); | ||
| Type mapType = new TypeToken<Map<String, Object>>() {}.getType(); | ||
| Map<String, Object> map = gson.fromJson(jsonResponse, mapType); | ||
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| response = ResponseEntity.status(200).body(map); | ||
| return response; | ||
| } | ||
| } | ||
| return response; | ||
| }); | ||
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| // Perform the search | ||
| CompletableFuture<Object> r = searchService.performDynFederatedSearch("plant", "", "", ""); | ||
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| List<Map<String, Object>> responseList = (List<Map<String, Object>>) r.join(); | ||
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| assertThat(responseList).hasSize(100); | ||
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| Map<String, Object> firstPlant = responseList.get(0); | ||
| assertThat(firstPlant.get("iri")).isEqualTo("http://sweetontology.net/matrPlant/Plant"); | ||
| assertThat(firstPlant.get("backend_type")).isEqualTo("ontoportal"); | ||
| assertThat(firstPlant.get("short_form")).isEqualTo("plant"); | ||
| assertThat(firstPlant.get("label")).isEqualTo("plant"); | ||
| assertThat(firstPlant.get("source")).isEqualTo("https://data.biodivportal.gfbio.dev"); | ||
| assertThat(firstPlant.get("type")).isEqualTo("class"); | ||
| assertThat(firstPlant.get("ontology")).isEqualTo("sweet"); | ||
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| Map<String, Object> secondPlant = responseList.get(1); | ||
| assertThat(secondPlant.get("iri")).isEqualTo("http://purl.obolibrary.org/obo/NCIT_C14258"); | ||
| assertThat(secondPlant.get("backend_type")).isEqualTo("ols"); | ||
| assertThat(secondPlant.get("short_form")).isEqualTo("NCIT_C14258"); | ||
| assertThat(secondPlant.get("description")) | ||
| .isEqualTo(new ArrayList<String>(List.of(new String[]{"Any living organism that typically synthesizes its food from inorganic substances, possesses cellulose cell walls, responds slowly and often permanently to a stimulus, lacks specialized sense organs and nervous system, and has no powers of locomotion. (EPA Terminology Reference System)"}))); | ||
| assertThat(secondPlant.get("label")).isEqualTo("Plant"); | ||
| assertThat(secondPlant.get("source")).isEqualTo("https://ebi.ac.uk/ols4/api"); | ||
| assertThat(secondPlant.get("type")).isEqualTo("class"); | ||
| assertThat(secondPlant.get("ontology")).isEqualTo("ncit"); | ||
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| assertThat(responseList.stream().map(x -> x.get("backend_type")).distinct().sorted().collect(Collectors.toList())) | ||
| .isEqualTo(configs.stream().map(OntologyConfig::getDatabase).sorted().collect(Collectors.toList())); | ||
| } | ||
| } |
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