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[SUGGESTION] Scanpy find markers step can fail when only one cluster found from clustering algorithm #48
Labels
enhancement
New feature or request
Is your feature request related to a problem? Please describe.
Pipeline can fail at the
Scanpy
find markers step when clustering resolution is too low which leads to having a single cluster. Here,Leiden
resolution0.2
lead to 1 cluster.Describe the solution you'd like
Error raised is not human readable:
Describe alternatives you've considered
We should provide a better error to the user.
Additional context
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