Add a simple entry point to only run PCACV

vib-singlecell-nf · Jun 8, 2020 · 2741eb5 · 2741eb5
1 parent 543f850
commit 2741eb5
Showing 1 changed file with 10 additions and 0 deletions.
diff --git a/main.nf b/main.nf
@@ -199,6 +199,16 @@ workflow single_sample_scenic {
     )
 }
 
+workflow pcacv {
+
+    include PCACV__FIND_OPTIMAL_NPCS from './src/pcacv/processes/runPCACV' params(params)
+    getDataChannel().map {
+        it -> tuple(it[0], it[1])
+    }
+    .set{ data }
+    PCACV__FIND_OPTIMAL_NPCS(data)
+}
+
 workflow single_sample_scrublet {
 
     include {