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added freshwater stream and biome #1477

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merged 11 commits into from
Jan 23, 2024
Merged

added freshwater stream and biome #1477

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eed2b27
added freshwater stream and biome
turbomam Jan 10, 2024
8bcf768
use contemporary annotation style
turbomam Jan 17, 2024
9169d5d
backmerge from main
turbomam Jan 17, 2024
f1e7c37
ENVO_03605008 freshwater stream biome
turbomam Jan 18, 2024
09f4cc1
adding determined by eq axiom
turbomam Jan 18, 2024
38de5eb
create freshwater stream ecosystem
turbomam Jan 18, 2024
2424fc5
def and other annotations for freshwater stream ecosystem
turbomam Jan 18, 2024
d40c558
update def to use ecosystem.yaml style
turbomam Jan 18, 2024
beddad5
follow def pattern for freshwater stream biome
turbomam Jan 19, 2024
0bb4c74
typos in freshwater stream ecosystem def
turbomam Jan 19, 2024
52eec7f
Merge branch 'master' into 1476-ntr-freshwater-stream-biome
turbomam Jan 23, 2024
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32 changes: 31 additions & 1 deletion src/envo/envo-edit.owl
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Expand Up @@ -4007,6 +4007,9 @@ Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_03605003>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_03605004>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_03605005>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_03605006>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_03605007>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_03605008>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_03605009>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_04000000>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_04000001>))
Declaration(Class(<http://purl.obolibrary.org/obo/ENVO_04000002>))
Expand Down Expand Up @@ -44977,12 +44980,39 @@ SubClassOf(<http://purl.obolibrary.org/obo/ENVO_03605005> <http://purl.obolibrar
# Class: <http://purl.obolibrary.org/obo/ENVO_03605006> (stream water)

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AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_03605006> "Water which is part of a stream."@en)
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AnnotationAssertion(<http://purl.org/dc/elements/1.1/creator> <http://purl.obolibrary.org/obo/ENVO_03605006> <https://orcid.org/ORCID:0000-0002-4366-3088>)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/creator> <http://purl.obolibrary.org/obo/ENVO_03605006> <https://orcid.org/0000-0001-9076-6066>)
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AnnotationAssertion(<http://purl.org/dc/elements/1.1/date> <http://purl.obolibrary.org/obo/ENVO_03605006> "2024-01-12T13:48:00Z"^^xsd:dateTime)
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AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_03605006> "stream water"@en)
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EquivalentClasses(<http://purl.obolibrary.org/obo/ENVO_03605006> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/ENVO_00002006> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/ENVO_00000023>)))
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SubClassOf(<http://purl.obolibrary.org/obo/ENVO_03605006> <http://purl.obolibrary.org/obo/ENVO_00002006>)

# Class: <http://purl.obolibrary.org/obo/ENVO_03605007> (freshwater stream)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_03605007> "A stream which is composed primarily of fresh water.")
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AnnotationAssertion(<http://purl.org/dc/elements/1.1/creator> <http://purl.obolibrary.org/obo/ENVO_03605007> <https://orcid.org/0000-0001-9076-6066>)
AnnotationAssertion(<http://purl.org/dc/elements/1.1/date> <http://purl.obolibrary.org/obo/ENVO_03605007> "2024-01-10T19:48:00Z"^^xsd:dateTime)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_03605007> "freshwater stream"@en)
EquivalentClasses(<http://purl.obolibrary.org/obo/ENVO_03605007> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/ENVO_00000023> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/ENVO_00002011>)))
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_03605007> <http://purl.obolibrary.org/obo/ENVO_00000023>)

# Class: <http://purl.obolibrary.org/obo/ENVO_03605008> (freshwater stream biome)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_03605008> "A freshwater stream ecosystem which is undergoing climactic ecological succession.")
AnnotationAssertion(<http://purl.org/dc/elements/1.1/creator> <http://purl.obolibrary.org/obo/ENVO_03605008> <https://orcid.org/0000-0001-9076-6066>)
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AnnotationAssertion(<http://purl.org/dc/elements/1.1/date> <http://purl.obolibrary.org/obo/ENVO_03605008> "2024-01-10T19:19:00Z"^^xsd:dateTime)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_03605008> "freshwater stream biome"@en)
EquivalentClasses(<http://purl.obolibrary.org/obo/ENVO_03605008> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/ENVO_03605009> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000056> <http://purl.obolibrary.org/obo/ENVO_01001827>)))
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SubClassOf(<http://purl.obolibrary.org/obo/ENVO_03605008> <http://purl.obolibrary.org/obo/ENVO_03605009>)

# Class: <http://purl.obolibrary.org/obo/ENVO_03605009> (freshwater stream ecosystem)

AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_03605009> "An ecosystem in which the composition, structure, and function of resident ecological assemblages are primarily determined by a freshwater stream.")
AnnotationAssertion(<http://purl.org/dc/elements/1.1/creator> <http://purl.obolibrary.org/obo/ENVO_03605009> <https://orcid.org/0000-0001-9076-6066>)
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AnnotationAssertion(<http://purl.org/dc/elements/1.1/date> <http://purl.obolibrary.org/obo/ENVO_03605009> "2024-01-10T19:18:00Z"^^xsd:dateTime)
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/ENVO_03605009> "freshwater stream ecosystem"@en)
EquivalentClasses(<http://purl.obolibrary.org/obo/ENVO_03605009> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/ENVO_01001789> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002507> <http://purl.obolibrary.org/obo/ENVO_03605007>)))
SubClassOf(<http://purl.obolibrary.org/obo/ENVO_03605009> <http://purl.obolibrary.org/obo/ENVO_01001789>)

# Class: <http://purl.obolibrary.org/obo/ENVO_04000000> (adfreezing)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "https://www.merriam-webster.com/dictionary/adfreezing") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/ENVO_04000000> "Adfreezing is a freezing process during which two objects adhere to each other via ice.")
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